yohD - yohF sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | CTT | ACT | GGC | AAC | CAA | AGG | GAG | ACA | GAC | TGG | CCT | ATG | GAT | CTC | AAT | ACA | |
| CTT | ATC | TCA | CAA | TAT | GGT | TAT | GCC | GCG | CTG | GTG | ATC | GGT | AGC | CTG | GCG | GAA | |
| GGT | GAA | ACC | GTG | ACT | TTG | CTG | GGA | GGC | GTT | GCG | GCG | CAT | CAG | GGG | CTA | TTA | |
| AAG | TTC | CCG | CTG | GTG | GTA | CTT | TCT | GTG | GCG | CTT | GGC | GGC | ATG | ATT | GGC | GAC | |
| CAG | GTG | CTC | TAT | CTG | TGC | GGG | CGG | CGG | TTT | GGC | GGC | AAG | CTG | TTA | CGC | CGT | |
| TTC | TCG | AAA | CAT | CAG | GAT | AAA | ATT | GAG | CGG | GCG | CAG | AAA | CTT | ATC | CAA | CGC | |
| CAT | CCG | TAT | CTG | TTT | GTC | ATT | GGT | ACG | CGC | TTT | ATG | TAT | GGC | TTT | CGG | GTG | |
| ATT | GGC | CCG | ACG | CTG | ATT | GGT | GCC | AGC | CAG | CTG | CCG | CCG | AAA | ATC | TTT | CTG | |
| CCG | CTG | AAT | ATT | CTC | GGC | GCA | TTT | GCC | TGG | GCG | TTG | ATT | TTT | ACC | ACT | ATT | |
| GGT | TAC | GCT | GGT | GGT | CAG | GTG | ATT | GCG | CCG | TGG | TTG | CAC | AAT | CTC | GAC | CAG | |
| CAT | TTG | AAG | CAC | TGG | GTC | TGG | TTG | ATT | CTG | GTC | GTG | GTT | CTG | GTG | GTG | GGC | |
| GTG | CGC | TGG | TGG | CTG | AAA | CGA | CGC | GGG | AAG | AAA | AAG | CCG | GAT | CAT | CAG | GCG | |
| TAA |
|
| AACCATTGCCCTGGATAAGGCGTTCGCGCCGCATCCGACATCCGGAGTACCATGCCTGATA |
| CGACGCTTGTGCGTCTTTTCATGCCGACCAAAATATTACCCAATGAAATATCCACGCACCT |
| CACTGCG
|
| CTA | TTC | TGG | GTT | GAA | CTG | TGG | ATT | CGC | CAA | CAT | AAA | GCC | GCC | ATC | CAC | TAT | |
| CAA | CGA | CTG | CCC | GGT | GGT | GTA | ATT | TGC | GCC | CTC | CGA | ACA | AAG | CCA | CAC | CAC | |
| CAG | GCT | GGC | AAT | CTC | ATG | CGT | TGC | GCC | AAA | ACG | CCG | CAA | GGG | AAT | CGA | AGG | |
| CTC | CGC | GTC | GGG | CTT | CAC | GTC | GCT | GTC | ATC | CAT | GCC | ATT | CAT | TGG | CGT | GGC | |
| GAT | CGC | CCC | AGG | CGC | GAC | TGC | GTT | CAC | CAA | AAT | CTT | ATG | CCT | GAC | CAG | CTC | |
| CAG | CGC | CAT | CGC | TTT | GGT | TAA | CCC | ACC | GAG | CGC | ATG | TTT | AGC | GGC | TGT | GTA | |
| GGC | GCT | GGC | ATC | CGG | CAG | CGG | CGT | ATG | TTC | ATG | TAC | CGA | CGT | AAT | GTT | GAT | |
| GAT | GCG | ACC | GCC | CTG | CCC | TTG | TTT | CAC | CAT | CTG | ACG | AGC | CGC | AAT | TTG | CGA | |
| GCA | TAA | GAA | TGC | ACC | ATC | GAC | ATC | AAC | GGT | AAA | AAT | CTT | GCG | CCA | CTC | ATC | |
| AAA | AGC | CAT | ATC | AAG | AAA | CGG | CGC | TTT | GGT | CAT | TGC | ACC | CGC | ATT | ATT | CAC | |
| CAG | CAC | ATC | AAT | GCG | CCC | CAG | CCG | TTG | AAT | GAG | TTT | CTC | CAG | CGC | CAG | TGC | |
| CCC | TTC | TGG | TAG | ATT | GCC | GAG | ATC | CAG | CTG | CAC | GAT | CTC | CGC | ACG | TAC | GCC | |
| GTG | GCT | AAC | TAC | CTC | ACG | CGC | GGT | ATC | TTT | TGC | CCC | TTC | TTC | ATC | TGA | GTG | |
| CCA | GGT | AAT | ACC | AAT | ATC | AAA | CCC | CTG | CTG | CGC | CAG | TAA | TAA | CGC | GCA | CTC | |
| TTT | GCC | GAT | CCC | CGA | ATC | GGA | GGC | GGT | AAT | AAT | CGC | AAC | CTG | TGC | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.