yafM - fhiA sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG TCT GAA TAT CGT CGT TAT TAC ATC AAG GGG GGA ACA TGG TTT TTC ACG

GTG AAT TTA CGA AAT CGT CGA AGC CAA CTT TTG ACC ACC CAG TAC CAG ATG

CTC CGT CAC GCC ATT ATT AAA GTT AAG CGA GAC AGG CCT TTT GAA ATC AAC

GCC TGG GTC GTT TTG CCA GAG CAT ATG CAC TGT ATC TGG ACA TTA CCT GAA

GGC GAT GAT GAT TTT TCC TCG CGC TGG CGG GAA ATT AAA AAG CAA TTT ACC

CAT GCT TGT GGA TTG AAA AAT ATC TGG CAA CCA CGT TTT TGG GAG CAC GCC

ATC CGC AAT ACC AAA GAT TAT AGG CAT CAT GTT GAT TAT ATT TAT ATA AAT

CCA GTA AAG CAT GGT TGG GTA AAG CAA GTG AGT GAT TGG CCA TTC TCA ACG

TTC CAT CGC GAT GTC GCG CGA GGG TTA TAT CCC ATC GAT TGG GCG GGG GAC

GTA ACG GAT TTT AGT GCC GGG GAG CGT ATC ATT TCA TAA

TTGTGCGCAGATGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAACTTGTGCCGG

ATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGC

GACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCG

TTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATAC

TTA CAT CAA CGC CCC CAT AAT CTT CAA CTC CAG CTC ATC CGG CAC TTC GTT

ATA CGA CAG CAC ATG CAG CCC CGG CGC AAA CAA CCT TGC ATA ACG CGC CAG

CAA AGG GCG CAG CTG CGG TGG CAC CAG CAG CAC CGG GTC TTT CCC CGC CGC

TTT CAT CTG CTC TTT CAC CTG TGG CAT CGT ACT CTG GAA CTG GTT GAG CAT

ATT CGG ATC GAC CGG CAC GCT GTC GAG CAT CAC TTT CCC GCC CTG TTG CGC

CTG ATT CAC CAC GTT GGT CAG CAG ATT TTC CAG CTC ATT ATT CAG CGT ATA

CAC CGT CAG CTC CTG CTT GCG AAC GAA CGG ATG GGT AAT GCT GCG CCG CAA

TGC CAG GCG CAC ATC GGC CGC CAG CAG AAT ATG ATC TTT CGT CAC CGT GCT

ACT GGC GAC CAG CAC GGT GGC GAT GGT GAC GAT ATC GCG CAG GGA AAC GCC

TTC GGT CAG CAG CGC CCG GTA CAC TTT CAG CAA CTG GCT GTA ATT GAG CGC

CGC GCT CAA ATC TTC CGC CAG ACG CGG TGC CGT CGA CGA TAA ACG GTT ATG

CAA CTG CGT AAT ATC ATC ATA GTT AAA CAA ATC AGG AAT ATA GCT GCG CAC

AAT CTT ATT TAC ATG GGT AGC GAT CAC GCT GGC GCT GTC GAT CAC CTG ATA

CCC CAT ATT CAG CGC CTT CGC TTT CTG CGC CGC CTG GAT CCA GGT GAC CGG

CAT CCC GTA CGC CGG GTC GTT CCC CTG CAC GCC GTC AAT CTC GCC GTA GGT

TTC GCT GGA GGG CAG GGC CAT CAG TTT ATC CGC CGG AAT ATC CGC TTC ATC

AGC CTT TAT GCC GTT GAT GAA AAT GGC GTA CTG ACT GGG CTT AAG GCG GAA

GTT TTC CCG AAT GCG GAT CTC CGG CAG CAG CAC GCC GTT GCC GTC AGA AAT

CAC CTG CCG CAC GCC GCG AAT CCG CTG GGT GAG CGG GTT ACC CTG TGC TTT

GTC CAC CAG CGC CAC CAG TTT GTA ACC GAG GCT TAA ACT GAT AGG CTC GAT

CAG CGG AAT GGT TTC CCA ACT GAC CTG CTG CTC GCT GGT TTC GGT GAT GGT

GCG GGT CAG CGT TTC GAG GCT TTT CTC TTC CGC CTC CGC CGC CAG CGG CTG

TTT GCT CAT CCG CCA GCC GGT AAA ACC AAG CAG GGC GCT GAA CAG CAA AAA

CGG CAG GTG CGG CAT TCC CGG TAC CAC CGC CAG CAC GAA CAT AAT CCC GGT

GGC GGT GTA GAG CAC CGA CGG GCT TGC CAG CAG CTG GTT ACG CAC GTC ATG

GGC GAT ATC GCC GTT GTC GCT GAC GCG GGT GAC GAT AAT CGC CGC CGC GGT

GGA GAG CAG CAG GGA AGG GAT CTG CGC CAC CAG GCC GTC GCC GAT GGT CAT

CAG CAC ATA CTG CTG GAA GGC AGC ATC GGC GCT CAG GTT GTA TTT GAA GAT

CCC GAT ACA GAC GCC GCC GAT CAG GTT GAT CGC CAG AAT CAT CAT CCC GGC

GAT GGC GTC CCC GCG CAC AAA CTT CGA TGC CCC GTC CAT CGC GCC GTA GAA

ATC GGC CTC GCT GGC AAC ATC TTT ACG CCG GGT TTG CGC CTG CGC CTG GTT

GAT CAA TCC GGC GTT AAG ATC GGC GTC AAT CGC CAT CTG TTT GCC GGG CAT

CGC GTC TAA GGT AAA GCG GGC AGA AAC CTC GGA AAT ACG CTC GGC CCC TTT

GGT GAC GAC AAT AAA GTT GAT TGT CAA CAG CGT CAG TAA ATC CGA GCG TGA

AAG CAT

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

yafM - fhiA sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.