yafL - yafM sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | TCC | TTG | CCG | TCG | ATT | CCA | TCC | TTT | GTA | TTG | TCG | GGA | TTA | CTG | TTG | ATT | |
| TGT | TTG | CCG | TTT | TCT | TCA | TTT | GCC | AGC | GCC | ACC | ACA | TCA | CAT | ATC | TCT | TTC | |
| AGC | TAC | GCC | GCC | CGC | CAG | CGG | ATG | CAA | AAC | CGT | GCG | CGT | TTA | TTA | AAA | CAG | |
| TAC | CAA | ACT | CAT | CTG | AAA | AAG | CAG | GCC | AGC | TAT | ATT | GTG | GAA | GGC | AAT | GCC | |
| GAA | AGC | AAA | AGG | GCG | CTA | CGC | CAG | CAC | AAC | CGG | GAG | CAG | ATA | AAA | CAG | CAT | |
| CCA | GAA | TGG | TTT | CCT | GCT | CCG | CTC | AAG | GCG | AGT | GAC | AGA | CGC | TGG | CAG | GCG | |
| CTG | GCG | GAA | AAC | AAC | CAC | TTT | TTA | AGC | AGC | GAC | CAT | CTG | CAT | AAC | ATT | ACC | |
| GAA | GTG | GCG | ATT | CAC | CGC | CTG | GAG | CAG | CAG | CTT | GGC | AAG | CCT | TAC | GTC | TGG | |
| GGC | GGT | ACG | CGG | CCT | GAT | AAA | GGC | TTT | GAC | TGT | AGC | GGG | TTG | GTT | TTT | TAT | |
| GCC | TAC | AAC | AAG | ATC | CTT | GAG | GCT | AAG | CTC | CCG | CGC | ACG | GCC | AAT | GAG | ATG | |
| TAC | CAC | TAT | CGC | CGG | GCA | ACG | ATT | GTG | GCG | AAC | AAC | GAC | CTG | CGC | CGG | GGA | |
| GAT | TTG | CTG | TTT | TTC | CAT | ATC | CAC | AGC | CGC | GAG | ATA | GCC | GAT | CAT | ATG | GGC | |
| GTG | TAT | TTG | GGC | GAT | GGG | CAA | TTT | ATC | GAG | TCG | CCA | CGT | ACC | GGC | GAA | ACC | |
| ATT | CGG | ATA | AGC | CGA | TTA | GCC | GAA | CCT | TTC | TGG | CAG | GAC | CAT | TTT | TTG | GGC | |
| GCG | CGC | AGG | ATT | TTG | ACG | GAA | GAG | ACG | ATT | TTG | TAG |
|
| GACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGG |
| CGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACA |
| ACCTCATTGCCAACCTTTCCTTTTCTTCTTACCGTTGAGAAAAAGGAGTCGCC
|
| ATG | TCT | GAA | TAT | CGT | CGT | TAT | TAC | ATC | AAG | GGG | GGA | ACA | TGG | TTT | TTC | ACG | |
| GTG | AAT | TTA | CGA | AAT | CGT | CGA | AGC | CAA | CTT | TTG | ACC | ACC | CAG | TAC | CAG | ATG | |
| CTC | CGT | CAC | GCC | ATT | ATT | AAA | GTT | AAG | CGA | GAC | AGG | CCT | TTT | GAA | ATC | AAC | |
| GCC | TGG | GTC | GTT | TTG | CCA | GAG | CAT | ATG | CAC | TGT | ATC | TGG | ACA | TTA | CCT | GAA | |
| GGC | GAT | GAT | GAT | TTT | TCC | TCG | CGC | TGG | CGG | GAA | ATT | AAA | AAG | CAA | TTT | ACC | |
| CAT | GCT | TGT | GGA | TTG | AAA | AAT | ATC | TGG | CAA | CCA | CGT | TTT | TGG | GAG | CAC | GCC | |
| ATC | CGC | AAT | ACC | AAA | GAT | TAT | AGG | CAT | CAT | GTT | GAT | TAT | ATT | TAT | ATA | AAT | |
| CCA | GTA | AAG | CAT | GGT | TGG | GTA | AAG | CAA | GTG | AGT | GAT | TGG | CCA | TTC | TCA | ACG | |
| TTC | CAT | CGC | GAT | GTC | GCG | CGA | GGG | TTA | TAT | CCC | ATC | GAT | TGG | GCG | GGG | GAC | |
| GTA | ACG | GAT | TTT | AGT | GCC | GGG | GAG | CGT | ATC | ATT | TCA | TAA |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.