yabI - sfuC sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | CAA | GCA | TTG | CTG | GAA | CAC | TTT | ATT | ACC | CAA | TCC | ACC | GTG | TAT | TCA | TTG | |
| ATG | GCG | GTG | GTG | TTG | GTG | GCC | TTT | CTG | GAG | TCG | CTG | GCG | CTG | GTC | GGT | TTG | |
| ATT | CTA | CCC | GGT | ACG | GTG | CTG | ATG | GCG | GGG | CTG | GGA | GCG | CTG | ATT | GGC | AGC | |
| GGC | GAG | TTA | AGT | TTC | TGG | CAC | GCC | TGG | CTG | GCA | GGG | ATT | ATT | GGC | TGC | TTG | |
| ATG | GGC | GAC | TGG | ATT | TCT | TTC | TGG | CTG | GGT | TGG | CGT | TTT | AAA | AAG | CCG | TTG | |
| CAT | CGC | TGG | TCA | TTT | CTG | AAG | AAA | AAC | AAA | GCA | CTA | CTT | GAT | AAA | ACT | GAA | |
| CAT | GCG | TTG | CAT | CAA | CAC | AGC | ATG | TTC | ACC | ATT | CTG | GTC | GGT | CGT | TTT | GTT | |
| GGC | CCG | ACG | CGT | CCG | CTG | GTG | CCA | ATG | GTG | GCG | GGA | ATG | CTG | GAT | CTG | CCG | |
| GTG | GCT | AAA | TTT | ATT | ACG | CCG | AAT | ATT | ATC | GGC | TGC | CTG | CTG | TGG | CCG | CCG | |
| TTT | TAC | TTC | CTG | CCA | GGG | ATT | CTG | GCG | GGC | GCG | GCG | ATC | GAT | ATT | CCT | GCC | |
| GGA | ATG | CAG | AGC | GGT | GAG | TTT | AAA | TGG | TTG | CTG | CTG | GCA | ACA | GCG | GTG | TTT | |
| TTG | TGG | GTT | GGT | GGC | TGG | CTG | TGC | TGG | CGG | TTA | TGG | CGC | AGC | GGT | AAA | GCG | |
| ACT | GAC | CGT | TTG | AGT | CAT | TAT | TTG | TCC | CGC | GGT | CGT | TTG | TTG | TGG | CTG | ACG | |
| CCG | TTG | ATT | TCT | GCC | ATC | GGC | GTG | GTG | GCG | CTG | GTG | GTG | TTA | ATT | CGC | CAC | |
| CCG | TTG | ATG | CCG | GTG | TAT | ATC | GAT | ATT | TTG | CGT | AAA | GTG | GTT | GGG | GTT | TAG |
|
| GAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA |
| CGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATA
|
| CTA | ACC | CGT | AAT | CCC | CAA | TAG | TGC | CGA | AGC | ACT | CGC | CTT | ACC | GCT | CAA | CAA | |
| CTC | ATT | GGT | CAT | ACC | CTG | CCA | GGC | GAT | GCG | CCC | GTC | GGC | GAC | TAC | TAC | CGA | |
| GCG | CGT | GGC | GAT | CCG | CGC | CGC | ATC | TTC | CAC | GCT | GTG | CGA | CAC | CAT | CAA | TAG | |
| CGT | CAT | TTT | TTG | CTG | CTG | GCA | GCT | CGT | GCT | CAC | CAG | CGT | CAA | CAT | CTC | CTG | |
| ACG | TAA | CGC | CGG | ATC | GAG | CGC | AGA | GAA | CGG | TTC | ATC | GAG | CAA | TAA | AAT | CGG | |
| CTG | TTC | GCG | TAC | CAG | ACA | ACG | CGC | TAA | CGC | CAC | TCG | CTG | TCG | CTG | ACC | GCC | |
| GGA | AAG | CTC | GCC | CGG | TAA | CCG | CGC | CAT | TAA | ATT | ATC | AAT | CCC | CAT | CTG | GCG | |
| GGC | GAT | AGC | GTG | CAT | TTT | CCC | CTG | CTG | TAC | CGC | GTT | CAG | TTT | CAA | TCC | CGG | |
| ATT | TAG | CCC | CAG | CCC | GAT | GTT | CTG | TGC | GAC | CGT | CAG | GTG | GCT | GAA | CAG | GTT | |
| GTT | CTC | CTG | AAA | CAG | CAT | CGA | CAC | CGG | ACG | GCG | TGA | CGG | CGG | CAT | AGT | TGT | |
| GTG | ATC | TAC | GCC | ATC | GAT | AGT | CAG | CGA | ACC | GCT | GGC | TGG | CGT | CAG | AAA | ACC | |
| GGC | GAT | CAA | ATT | CAG | CAG | GGT | ACT | TTT | ACC | CGC | GCC | GCT | TGG | CCC | GAG | GAT | |
| CGC | CAC | CTG | CTC | GCC | GCG | TTC | CAC | CGT | TAA | GCT | AAA | ACG | CAT | CGG | CAA | ATG | |
| GTG | GTA | AAG | CCA | GGT | GAT | ATC | AGT | CAG | TTT | TAA | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.