Citrobacter freundii vexE - orf sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG AGC TTG CAC TCT ACA TGT AAA AAA ATA TCG CCA ACC ACC CTG CTC AAA

CAA GAG GAT TGG GAG GGG CTA TGT CAC TAT TTC GGT CAG CAT CCC GAA AAA

GTG CGA GAT AGT GCT GGA AAT GAG CAA AAC ATT CTT CTC TTC GCT ATC GCG

TGT TTG CGT AAA GAT GAA ACA GAT GCC GCG CTG ACT TTG TTG TCA GAC CGT

GTG CTG ACG GCA AAG AAT AGC CGT GAT TTA TTG CGA CGC TGG ATT ATT TCG

CCG CTG GCA TCA CAT CAT CGG GAC GCT GTA CTA CAG GTG GTT AAC AAA CTG

CTG GCG GTG AAT GTG TGC CAG CCG GAG GAT GTC CTG CTG GTC GCA AGC GTG

CTG CTT AAG AGT AAA CAA TAT GCG ACT GTT GCT GAC TTA GCC GAG CGG GCA

TGG CTC GCT TTT TCG GGC AAT AGC CAA ATT TTT GCC CTC CAT CTG CGC AGC

CTG ACG CTG GTG GAT AAA GAG TTA CAG GCA ATC TCG TTG GCC AGA ACA CAG

GCG CAG GAA GCT CCC CCA CGG GGA GAT ATG ATT GAG ACC TGC CTC CGT TTC

TTA AAT AAA AGC CGC CTA CCA GAA GAT CAT GAC CTG GCC CGC GCA TTG CTC

CCT TTC TTC GTG TTA GAA AGC CAG GAG TCG GCG GGG CTG GCG GTT GAT ACG

CAG TGC GCT GTC GGT AAA TAT CAG GAA GCC ATT CAG ACT GGG GAG TCC GCA

TTA GGC CGT GGG TTG GAT GGT GCG GCG CTG CGT CGT AGC CTG GGG CTT GCC

TAC TAT CAA TCC GGT CGC AGC CGG GAA GCG AAG CTT CAG GCC GCT GAG CAT

TGG CGT CAT GCC CTG GAT TTT AAC CCT GAT AAT TTA CGG ATC GTG ACC CTG

TAT GCC GAT GCC TTA ATC AGA ACG GGT CAG AAT GAG AAA GCC ATT CCG TTA

CTG CAG CAG TCG CTC GCG ACT CAT CCT GAT CTT CCT TAT GTC AGA GCC ATG

TAT GCC CGA GCA CTG CGC CAG GTT GGG CAA TAC GCT GCT GCC AGC GAT GAG

TTT GTA CAA CTG GCA AGG GAA AAA GGG GCG ACC AGT AAA TGG AAC CGT TAT

GCC GCG GCG GCG TTG TTA CAG GCG GGG AAA ACA AGC GAA GCG GAA AGC GTC

TTT GAG CAC TAT ATT CAG GCC AGA GCA AGC CAT CTG CCT CAG TCA TTC GAA

GAG GGG CTG CTG GCG CTT GAT GGC CAA ATA TCT GCC CTT AAT CTA CCG CCT

GAG CGC CTT CAC TGG GCA TGG GAA GTT GCC CGC ACA CAG TCC GGT ATC GAG

CGC GAT GAA TGG GAA CGC CGG GCG AAG TGG GGG TAT CTT GCC GAT AAT TAT

CTC CTC GAC TGG CTT GAA TGC CGT GGA GAG CAG GCC AAC GAA CCG ATG TAT

CGG TTG GCC GAT ATA TCG CAT GTC GAG CAG TTT TTC CAA CGG CTG CAG CTC

GAT AAG CGT GGT TGC ATT GTT GTA TCG GCT CAT ATG GGC GCA ATG TAT GCC

GGG CCG ATG ATC CTC TCC TTG CTG GAA ATG AAC AGT AAA TGG GTG GCT TCC

ACG CCT GGC GTG CTC AAA GGG GGC TAC GGT GAG CGG TTG ATT TCG GTT AGT

GAC AAA AGC GAA GCG GAC GTG GTC AGG GCC TGC ATA CAG ACC TTA CAT AGT

GGG CAG TCG CTT GTT GTG GCG ATC GAC GGC GCG CTG AAT TTG AGC GCG CCG

ACT ATC GAC TTT TTC GGC CAG CAG ATT ACC TAC TCC ACC TTT TGC TCT CGA

CTT GCC TGG AAA ATG CAC TTA CCC ACC GTA TTT GGT GTT CCG GTG TGG CGA

GAC GGG CGC ATC CAT TTT GTT TTG GAG AAA ATG GTC AGA TCC GCA GAG GTT

CGA AAG CCA GTC TTC TTT TAT CGA GCG CTG GAA AGA CAA TTA CCT GAA ATG

CGA ACC CAA ATC CTG AAT AGC GGG CCT GAA AAT CTG AGA CTG TCG GGG GGG

ATT TGG CGA AAT ATC ACG CGC AGG GAT GAA ACA TCT TCG GGC TGA

AAAGACGTTTGCCCCGTGATGCCTTTGGCGCACCAGGCGGGGCCGCCCGCTAAGTAAAACT

GAGTTATTCTATTTAGAAAGCATCCGTTCATTAACGTTCGGGTGCTTTTTTCGTTCTAACG

AGCTGAAAAACGGAGAATTATATAATAGCTACGTTATACCTGATTGTGGTTCTGTTTGTCT

GAGGGTTACCAGAAGACAGTATCCTGAAGTCATCCCTTAGCAATGTTAAATAGCGGCATCG

AAATCCGCTGGTAGCGTACTGTTACCTGTACCCAGGCTCGTTGCATTAATACCGTATCAAG

CCAGAGCCCATGCTTGAATCCAATGTTCGTCAGCGTACCTATTTACGTAATCCGGCCTCTA

TGGACTTTCAGCGATCCCTGATTATGCTGTCGCCGACGATAGCGATCAACTGCCGATAATC

CTGCGTTTCAGCCCACTCAATTACATGCGTAGCAACGCTTTTCCCACCCCCTGACGCTGTG

CCGTCGGGTCAATATAAATCGAATCTTCGAGGGTATAGCGATAGGCATAACGCTCGCGGTA

ACGGGTGAGATAGCAATACCCGATGACCTTATCTTCTTGCAATGCGACAACCCATGGCAGT

CCCAGACTGCGGATTTTTTCCAGACGATCCTGCATCTCGCGGGTATCCGGCGGGTCAGTTT

CAAAGCTGCCGGTACCGTGATTAACATGATGGGCGTAGATATCGCGTATGGCGGGGATGTG

TTTTTTTTCAGCGTTAACGATTTTCATTGACCAGCTCCCATTGGCATCTTTGTCCAAATTA

CCTCAAACGGCTGGAGGGAAGGTAAGTGCAAAAAATTATGTGTCTATACCCGTCATTCTTT

CAAGCTGCATGTACCTTGCTACGCTAGCTCACTTCAGTCACATAGTGCGCGATGCTCCTGG

GGATTCACTCACTTGCCACCTTCATGTAACTCGAATTATTTAGGGTATATAAATATTTTCA

ATGTAAATAAGCTTTCAAATTGTAAGGGTAAACGGGGTGTGGTTGATACTGTCAATAATAC

GCAAGGTTGGTAAATACTTTAGCGAGTTGAGCAATGCACAATTCTTCGCGCACGTATTATG

GCGGATACCAAAATACCAATTTTGGTAGATTTCTATGATAGGTCAAGAAGTCATTTGATTT

TATTGAGTTTTTACTGTTTTTTTTTACTGTACTTAGTTCTGCTTATGACTGTACCTTTAAT

TTCATTTATCGACCCTGTTCGAAACTTAAAATTAGGTTATATTATTTACATTGTTATCTTT

GTTGTTATCAGGGCATTATTATCAGAACTTTCTCTATCCGCACACAATAGTTACCATGCAA

ACAGTTGCGCGGTGTAGCTATGCCAACCAGCAATAGTTATCATCGTCACAAGGTTTCGTCA

TGCAAACTTAATGTAAATCCAGAATTC

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

Citrobacter freundii vexE - orf sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.