vacB - yjfH sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

GTG ACG AAA ATC TTC ATC AGA GAT GAC AAC GGA GGA ACC GAG ATG TCA CAA

GAT CCT TTC CAG GAA CGC GAA GCT GAA AAA TAC GCG AAT CCC ATC CCT AGT

CGG GAA TTT ATC CTC GAA CAT TTA ACC AAA CGT GAA AAA CCG GCC AGC CGT

GAT GAG CTG GCG GTA GAA CTG CAC ATT GAA GGC GAA GAG CAG CTT GAA GGC

CTG CGT CGC CGC CTG CGC GCG ATG GAG CGC GAT GGT CAA CTG GTC TTC ACT

CGT CGT CAG TGC TAT GCG CTG CCG GAA CGC CTC GAC CTG GTG AAA GGT ACC

GTT ATT GGC CAC CGT GAT GGC TAC GGC TTT CTG CGG GTT GAA GGG CGT AAA

GAT GAT TTG TAT CTC TCC AGC GAG CAG ATG AAA ACC TGC ATT CAT GGC GAT

CAG GTG CTG GCT CAG CCG CTG GGT GCT GAC CGT AAA GGT CGT CGT GAA GCG

CGT ATT GTC CGC GTA CTG GTG CCA AAA ACC AGC CAG ATT GTT GGT CGC TAC

TTT ACC GAA GCG GGC GTC GGC TTT GTG GTT CCT GAC GAC AGC CGT CTG AGC

TTC GAT ATC TTA ATC CCG CCC GAT CAG ATC ATG GGC GCG CGG ATG GGC TTT

GTG GTC GTA GTC GAA CTG ACT CAG CGT CCG ACT CGC CGC ACC AAA GCG GTG

GGT AAA ATC GTC GAA GTG CTG GGC GAC AAT ATG GGC ACC GGC ATG GCG GTT

GAT ATC GCT CTG CGT ACC CAT GAA ATT CCG TAC ATC TGG CCG CAG GCT GTT

GAG CAA CAG GTT GCC GGG CTG AAA GAA GAA GTG CCG GAA GAA GCA AAA GCG

GGC CGT GTT GAT CTG CGC GAT TTA CCG CTG GTC ACC ATT GAT GGC GAA GAC

GCC CGT GAC TTT GAC GAT GCA GTT TAC TGC GAG AAA AAA CGC GGC GGC GGC

TGG CGT TTA TGG GTC GCG ATT GCC GAC GTC AGC TAC TAT GTG CGT CCG TCA

ACG CCG CTG GAC AGA GAA GCG CGT AAC CGT GGC ACG TCG GTG TAC TTC CCT

TCG CAG GTT ATC CCG ATG CTG CCG GAA GTG CTC TCT AAC GGC CTG TGT TCG

CTC AAC CCG CAG GTA GAC CGC CTG TGT ATG GTG TGC GAG ATG ACG GTT TCG

TCG AAA GGC CGC CTG ACG GGC TAC AAA TTC TAC GAA GCG GTG ATG AGC TCT

CAC GCG CGT CTG ACC TAC ACC AAA GTC TGG CAT ATT CTG CAG GGC GAT CAG

GAT CTG CGC GAG CAG TAC GCC CCG CTG GTT AAG CAT CTC GAA GAG TTG CAT

AAC CTC TAT AAA GTG CTG GAT AAA GCC CGT GAA GAA CGC GGT GGG ATC TCA

TTT GAG AGC GAA GAA GCG AAG TTC ATT TTC AAC GCT GAA CGC CGT ATT GAA

CGT ATC GAA CAG ACC CAG CGT AAC GAC GCG CAC AAA TTA ATT GAA GAG TGC

ATG ATT CTG GCG AAT ATC TCG GCG GCG CGT TTC GTT GAG AAA GCG AAA GAA

CCG GCA CTG TTC CGT ATT CAC GAC AAG CCG AGC ACC GAA GCG ATT ACC TCT

TTC CGT TCA GTG CTG GCG GAG CTG GGG CTG GAA CTG CCG GGC GGT AAC AAG

CCG GAA CCG CGT GAC TAC GCG GAG CTG CTG GAG TCG GTT GCC GAT CGT CCT

GAT GCA GAA ATG CTG CAA ACC ATG CTG CTG CGC TCG ATG AAA CAG GCG ATT

TAC GAT CCA GAA AAC CGT GGT CAC TTT GGC CTG GCA TTG CAG TCC TAT GCG

CAC TTT ACT TCG CCG ATT CGT CGT TAT CCA GAC CTG ACG CTG CAC CGC GCC

ATT AAA TAT CTG CTG GCG AAA GAG CAG GGG CAT CAG GGC AAC ACC ACT GAA

ACC GGC GGC TAC CAT TAT TCG ATG GAA GAG ATG CTG CAA CTG GGT CAG CAC

TGT TCG ATG GCG GAA CGT CGT GCC GAC GAA GCA ACG CGC GAT GTG GCT GAC

TGG CTG AAG TGT GAC TTC ATG CTC GAC CAG GTA GGT AAC GTC TTT AAA GGC

GTA ATT TCC AGC GTC ACT GGC TTT GGC TTC TTC GTC CGT CTG GAC GAC TTG

TTC ATT GAT GGT CTG GTC CAT GTC TCT TCG CTG GAC AAT GAC TAC TAT CGC

TTT GAC CAG GTA GGG CAA CGC CTG ATG GGG GAA TCC AGC GGC CAG ACT TAT

CGC CTG GGC GAT CGC GTG GAA GTT CGC GTC GAA GCG GTT AAT ATG GAC GAG

CGC AAA ATC GAC TTT AGC CTG ATC TCC AGC GAA CGC GCA CCG CGC AAC GTC

GGT AAA ACG GCG CGC GAG AAA GCG AAA AAA GGC GAT GCA GGT AAA AAA GGC

GGC AAG CGT CGT CAG GTC GGT AAA AAG GTA AAC TTT GAG CCA GAC AGC GCC

TTC CGC GGT GAG AAA AAA ACG AAG CCG AAA GCG GCG AAG AAA GAC GCG AGA

AAA GCG AAA AAG CCA TCG GCG AAA ACG CAG AAA ATA GCT GCA GCG ACC AAA

GCG AAG CGT GCG GCG AAG AAA AAA GTG GCA GAG TGA

TCAATACCCTCTTTAAAAGAAGAGGGTTAGATTGCTGACAAAATGCGCTTTGTTCATGCCG

GATGCGGCGTGAACGCCTTATCCGGCCTACATAATCACGCAAATTCAATATATTGCAGAGA

TCATGTAGGCCGGATAAACGTAGTGCATCAGGCAAAACGTAAACAACGAGTACATTA

ATG AGC GAA ATG ATT TAC GGC ATC CAC GCA GTG CAG GCC CTG CTG GAG CGC

GCC CCT GAA CGT TTT CAG GAA GTC TTT ATT TTA AAA GGC CGT GAA GAT AAA

CGT CTG TTA CCG CTG ATT CAC GCC CTT GAG TCT CAG GGC GTG GTT ATC CAG

TTG GCA AAC CGC CAA TAT CTC GAC GAG AAA AGC GAC GGT GCC GTG CAT CAG

GGC ATT ATC GCC CGC GTG AAG CCA GGA CGT CAG TAT CAG GAA AAC GAT CTG

CCG GAT CTG ATC GCT TCG CTC GAT CAA CCG TTC CTG CTG ATC CTC GAC GGC

GTA ACC GAT CCG CAC AAC CTC GGC GCG TGC CTG CGT AGT GCG GAC GCC GCA

GGC GTT CAT GCG GTG ATT GTG CCG AAA GAT CGC TCC GCA CAG CTC AAC GCT

ACG GCG AAA AAA GTA GCC TGC GGC GCG GCA GAA AGC GTT CCG CTG ATT CGG

GTG ACT AAC CTT GCG CGC ACC ATG CGT ATG TTG CAG GAA GAG AAT ATC TGG

ATC GTC GGT ACG GCA GGC GAG GCG GAT CAT ACA CTC TAT CAG AGC AAA ATG

ACC GGA CGC CTG GCG CTG GTG ATG GGT GCG GAA GGT GAA GGT ATG CGT CGC

CTG ACT CGT GAA CAT TGC GAT GAG TTG ATC AGC ATC CCG ATG GCT GGA AGC

GTT TCT TCC CTG AAC GTT TCG GTT GCG ACC GGA ATT TGC TTA TTT GAA GCG

GTG CGC CAG CGC AGC TAA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

vacB - yjfH sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.