tldD - f986 sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

TTA CGC AGT ACC GCC AAC AGT CAG GTT ATC GAC TTT CAA CGT TGG CTG GCC

CAC GCC AAC CGG CAA ACT TTG CCC TTC TTT ACC GCA GAC ACC CAC GCC GTT

ATC CAG TTT CAG GTC GTT GCC AAC CAT CGA AAT CTG CTG CAT GGT TTC GAT

ACC GGA ACC AAT CAA CGT TGC GCC TTT CAC CGG CTT CGT TAC TTT ACC GTT

TTC AAT CAG ATA TGC TTC TGA AGT GGA GAA AAC GAA TTT GCC GGA GGT GAT

ATC CAC CTG ACC GCC ACC AAA GTT CGG TGC ATA GAT ACC GTA CTC AAC GGA

TTC AAT AAT TTC CTG CGG GGT CGA TTT ACC CGG CAG CAT ATA GGT GTT GGT

CAT ACG CGG CAT GGG CAG ATG GGC GTA GGA TTC ACG GCG ACC GTT GCC AGT

CGG CGT CAT CCC CAT CAA ACG CGC GTT GAG TTT ATC CTG CAT GTA GCC TTT

CAG AAT GCC GTT CTC AAT CAG CAC GTT GTA CTG GCC TGG CGT ACC TTC GTC

ATC AAT CGC CAC CGA ACC TCG GCG ATC GAC CAT CGT GCC ATC ATC AAC CAC

GGT ACA CAG TTC TGA AGC CAC CAG CTC CCC GAC CTG TCC ACT AAA TAC TGA

AGT GCC ACG GCG GTT GAA GTC GCC TTC CAG ACC GTG ACC AAC CGC TTC ATG

CAA CAG CAC GCC CGG CCA ACC TGC GCC AAG TAC TAC CGG CAT GGT GCC CGC

TGG TGC AGC AAC GGC AGA AAG ATT GAC CAG CGC CAT ACG CAC TGC TTC TTT

TGC CCA TGC ATC CGC ACG GAC TTC GCC GTC GAG ATC GGC AAG GAA GAA TTC

ATA ACC AAA ACG ACC GCC GCC GCC ACT GGC ACC GCG TTC GCG TTT GCC ATC

TTC TTC GAC GAG AAC GCT CAC GGA AAG ACG CAC CAG CGG ACG GAC ATC CGC

CGC TAG CGT GCC GTC GGT GGC CGC AAC CAA AAT TAA TTC ATA GAC ACC ACT

GAG GCT GGC AGT CAC TTC CTG TAC GCG CTT GTC CGC TTC GCG GGC AAC CTT

ATC GAC GCG ACG CAG GAT ATC CAG CTT CTC TTC ACG GCT CAT GCT TTG CAG

CGG ATC TAC CGA GGT ATA CAA CGG GCT ATG CTC TAC CGC GCC CAG CGT CTG

TAC TTT ACC ATC ACC ACT ATC ACG GAC GAT GGT GCG CGC CGC TTG CGC ACT

CTG TTC CAG CGC CAG CAG GCT GAT TTG GTC AGC GTA AGC AAA TCC GGT TTT

TTC ACC GCT GAT TGC ACG CAC ACC AAC GCC CTG ATC GAT GTT GTA AGA ACC

ATC TTT AAT AAT GCG GTC TTC TAA AAC CCA GGA TTC GTG ATA GCT CGA CTG

AAA ATA GAG ATC GCC ATA ATC AAG GCG ACG TTC GGC CAG TTG ACC GAG GAT

CGC GAA CAA GTC CTG ATG TTT CAG GCC GTT CGC CGC TAG CAA TTG TTC ACT

TAC CAG GTT AAG ACT CAT

CGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGT

GAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTGTAGGCCTGATAAGACGCACAGCGT

CGCATCAGGCAACGGCTGTCGGATGCCGGCGTAAACGCCTTATCCGACCTACGGTTATGTT

CCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCG

TAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGT

CGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTC

TGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTC

AAA

TCA TTG CGC TTT TTC TTT ACG CGG TTG GCG CAA CAC TTC GTT GAT TTG CGG

ATC GTC CAG CGG ACC CGA AAT GTG ATA GCG CAA AAT GGA GAC TTT GCT CCA

CAG CGG CCC CAG CAC TTT ACT GGC GGC AAA CAC TGC CGC GCC AAC AAT GGG

GTT AAC CGC AAA AGC CGC AGC CAC GCC CAC CGT CGC AGA AAT CTC TGG TGC

GAC AAC CGC TTC CAT ATT CAG GTC GCG ACG TAC CAG ATT TAC CGA CCC TTT

CAT GGC GAT ATC CGC CTC CAG GCC ATC CAC CAG CGT GTC GTC GGT GTG CAT

AAC GCC GTC TTT AAT CCA CGC GGT GCT GCG AAT GGA GTC AAA ATA GAA CCC

TTC GCC AAA AGT GTC TCT GAA ATC AAA ACG CAG CTT ACG CAT CAG GGC ATC

TAC GCT CAA TAA GCG CAG CAA TTG CCC GGC ATG TCC GGT ATT GAT TTC GGT

AAT TTC GCC TTT ACC CAG TTG AGT ATG AAT GAT GCC ATT CAA CGT CGC TTC

ATC TGG CTG CCA GGG TGC TTT GCG CCA GTG TAA ATC GTA ATC CAC ATT AAA

TGA CGA CTG GCG TAT GGG CGT CGT GAC ACC AAA AAA TTC TGC GGC GGC ATC

AAT TTT CTG CCC GCG CAG TTT TCC TTT CAG CGA GGT ACG TTC ATT CCC CGG

ATT ATT AAC CCA TTC ACC ATC GGC AGT AAG CCG CGA GAA ACC AGT ATC AAT

CAG TCC ATT GGT CAG CGT TAA CGT ATC GCC AGA AAT GGT GAT ATC ACT GTC

AAT GCG ACC GAA TTT TTG CCC CCA GAA CCA GCA CTC TGT GCA TCG TAT TTG

GGC GTC CGG CCA GCC ACG GAA GTT AAT GCG CTC CGT TGT CGG GAA AGG TGA

TGA CGG CGT TGA ATC ACC ACG AGT TTT CGC CAC GCT CGG GTT GTA ATA AAG

ATA TTT GAT ATT CGC CAG CCA CGG CGC GTT ATT ACG CAT CGC TAG CGT GGC

GTT GAT TTC ACG CCC TTG CGC TTC AAC CAG GGT GCC ATT TGC CGT CGG TTG

CGA AAC AAT ACT CAG GTT ATT CCA TTG CTG ATT TCC CAG TGA CAA CAT AGG

CGT ACG TAA CGT TAT GTG TTG TGG GAA ACT CGC TGC ACC ACC GAC ACT CTC

CGC AGC GCC TTT CTG GAA CAG GGC CAG CCA CTC GGC ACC ATT CAT CGG CGG

CAT ATT GAG TTC AAC GCC ACT TTG TTC CGG CAA CGG CGG GAG CGT TTT ACT

GTC TGC CGC CCA AAT AGC ACG ATC GAG CGT CAG CTT TTG ACC GAG CAA CCA

GCG GCT ATT GAA ATG ATT ATC CGC ACC AGC CTG TCC GGT TAA TTC AAA GCT

GTT GAG ATT GCC ATC AAC CTT AAC GTT TAC CGC TAG TGG TTC ACC CGC AGG

TTT GGC TAA CGG TGA AGG TAA GTG ACT GCT CAC ATT CTT TAG ATC GCC GTT

CAG CTC TAT GTT ATA GGT CGC ACC AGC ATG ATA AGG CAG ATC AAT GCC CAC

TTT ACC ATC CCA CGC CAC GCT GCC ACT CAA TGC TTC GTT CAC CGC TTC AGG

CAG AAC GCC GGT TTT CGC CGG TTG CCA GTT ACC GTT GAG GTT TAC CGC TAC

CTG GTA GGC TTT TGC CCC TTC TTT GGT GGA AAA ATC CAC GTT CAA CGG CTG

ATT AAA CCA GCT TGC TGT CAG TGG TTC ACT TTG CAG ATC GCT ATT GAT AAA

GCT GAA TTT ACC GCT CAA ATT TTT CAG GGT GCT GTC GAG TGG TTT GAT AAA

CAG ACT GTT ATT ACG CAG CGT CAC TTC ACC TTT CGC GGT TAC CAG TTC GCC

GTT CAG CGG GAT ATC AAG ATG TAA GCG AGC ATT CAC ATC GCC GTC GAG CTG

GAG TTC TTG CAG GGT CGC ACC CAG AGA ATC TTT CAG CGG TGT CTC ATC AAA

GTA AGG GCC AAC GGC TTT ACC CGG ACC TTT AAT GTC AGC GTC AAT CAG CAG

TTT TTC TTT TGA GTA GTC AGG GAT CAC TGC GGT AAG ATT ACT CGC GCG CAC

GCC GCC CAG ATT AAC GCC ATC GGT TTT CAT CCA TAA ACC GTC GTT AAT AAA

GTC CAG TTC AAT ATC AAG GTT AGT TAA TGC AGG CCA GTC CGG CTG GAA GGC

AAA CTT CGC GTT GCG CAG CGG CAC CAG CAC TTC AAA CTG ACC TTC GTT GTG

TTT ATA GGG GAA GAG TTG CGG ATT GCC ACC ATA AAC CAG CGT CGC GTT ATC

CGC TTC ACC GCC CTG AAT CGC GCC ACT TAA GTA ATC AAC CAG GTC TTT ACC

CAT CAA GTT TTC CGG GAA ATA GCG CCA GGC TTG TGA ACC ATC ATC GGT ACT

GAT GCC AGC CAG AAT ACC CAG CCA GGG TTC ATC GTT AGC AGG TTG CAG GTA

ACG AAA ACC GCC GCG CGC ATG GAC GGC TTT GGC TTT AAC GTC AAT ATT ACG

CCC ATC CAG CTG GAA ACC TTT GTT ATT GTT CAG CCA GCT TAT AGT TGC CTG

GCC GTC GGC GAT TTC TAG TGG CGC ACG GAA TAC CGT TTC GTA AGG CAT CTT

TGC CTG CTT CAT CGA CGC GGT AAG CAA ACC ATT TTC AAC GCT GCC GGA AAG

CGT CCC GGA GAA GTG TTC CGC ACC CGG TAA TAA TTT CCA TTG CTT CCA GGC

CAG ATC GCT CCA CGA TGC CTG AAA ACG GGT CTT GTC TGC CGC CTG AAG CGG

GAT ATC CAG CGC CAG AGT GTT AAT CTT GCC GCT CGG TTG TGT GGA GCG CCA

AAC ATC ACC CAG TGC AGG TGA AAG TTT CGC GGC CAG CGG GCG TAT GCC CTC

CAG GCC TGC CAG CTC CAG ATT ACT GGC GCG AAT CCG GAG TTC GTC ACT GCG

TTT ATT GTC TTT GCC GCC AAC GTC CTG TTC CGG TAT CCA GGC CAG CGT CAA

TGC TCC GCT CGG CCA GGG TTT GCC GTC CAT CGT GAT CCG TGT ATC GGG AAT

AGA GAA CTG CCA GCC CGG ATT TTC ACG CGT AAT ATG CGC GGT CAG ATT ATC

CAC

Back to the table of contents

Please send questions and comments to Sophie.Bachellier@pasteur.fr.

tldD - f986 sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.