S. typhimurium rpsU - dnaG sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG CCG GTA ATT AAA GTA CGT GAA AAC GAG CCG TTC GAC GTA GCT CTG CGT

CGC TTC AAG CGT TCC TGC GAA AAA GCA GGT GTT CTG GCG GAA GTT CGT CGT

CGT GAG TTC TAT GAA AAA CCG ACG ACC GAA CGT AAG CGC GCT AAA GCT TCT

GCA GTG AAA CGT CAC GCG AAG AAA CTG GCT CGC GAA AAC GCA CGC CGT ACT

CGT CTG TAC TAA

TCTTTTGAGAGCGGGCTGCTCTCAATTCAGATCGAGTTGTAGTTGTAAGGCCGTGCTTCCG

AAAGGAATGCGCGGCTTGTTTTCGTTTATGCATTAGCATATACACAAAATCATTCATGCTG

CGTCCAGGCGGCAAGAGAGTAAATCCCCGGCGCTTACGCAAGTCAGCGACAGGGGTGAGCA

AACGTAGCCAACACTACGGCAGCCTGAAGAATGACGTGTATAAAAGGGGCAT

ATG GCT GGA CGA ATC CCA CGC GTA TTC ATT AAT GAC CTG CTG GCG AGA ACC

GAT ATC GTC GAT CTG ATC GAC GTG CGC GTA AAA CTC AAG AAA CAG GGC AAG

AAC TAT CAC GCG TGT TGT CCA TTC CAT AAT GAG AAA ACC CCT TCT TTC ACC

GTA AAC GGT GAA AAA CAG TTT TAT CAC TGC TTT GGA TGC GGC GCG CAT GGC

AAT GCG ATC GAC TTT TTG ATG AAT TAC GAC AAG CTC GAA TTT GTC GAA ACC

GTC GAA GAA TTA GCG GCC ATG CAT AAC CTG GAA ATT CCC TAT GAA GCA GGC

ACC GGG CTT AGC CAG ATA GAG CGC CAT CAA CGG CAA AAC CTC TAT CAG TTG

ATG AAT GGT CTG AAT GAC TTT TAT CAG CAG TCG CTT ACC CAT CCT GCG GCA

AAA CCT GCG CGT GAC TAT CTG CAA AAG CGC GGT CTG AGC GCT GAA ATT ATT

CAG CGT TTC GCC ATT GGC TTC GCG CCG CCA GGG TGG GAT AAC GCG TTA AAG

CGC TTC GGT AAT AAC AGC GAT AAC AAG GCA TTG TTG CTG GAT GCC GGG ATG

CTG GTC AAT AAC GAG CAG GGC AGC ACT TAC GAT CGT TTC CGT AAT CGG GTC

ATG TTC CCT ATT CGG GAC AAA CGC GGC AGG GTG ATT GGT TTT GGC GGT CGA

GTA CTG GGG AAC GAC ACG CCG AAA TAC CTT AAC TCT CCG GAA ACG GAC ATT

TTC CAT AAA GGC CGC CAG CTA TAT GGT CTT TAT GAG GCT CAG CAA TAT AGT

GCT GAA CCG CAA CGC TTG CTT GTG GTC GAA GGT TAT ATG GAT GTC GTC GCA

CTA GCG CAA TAC GAC ATT AAC TAT GCG GTC GCT TCG CTG GGT ACC TCA ACC

ACG GCA GAC CAT ATG CAT ATG TTA TTC CGG GCG ACG AAC AAC GTA ATT TGC

TGT TAC GAC GGC GAC CGG GCT GGC CGT GAT GCC GCC TGG AGA GCG CTG GAA

ACA GCA ATG CCT TAT ATG ACC GAC GGT CGG CAG GTA CGC TTT ATG TTT TTA

CCT GAC GGC GAA GAC CCG GAT ACG CTG GTG CGT AAA GAA GGC AAG GCG GCT

TTT GAA GCG CGG ATG GAG CAG GCG CAG CCG CTC TCT ACG TTT CTG TTT AAT

AGC CTC CTG CCG CAG GTG GAT TTA AGC TCG CCG GAT GGC AGC ACG CAG TTA

GCC GCA CTG GCG CTG CCG CTC ATT AAT CAG GTG CCT GGC GAC GCA CAC CGT

ATT CAG TTG CGC CAG ACG TTG GGG CTG AAG TTA GGC ATT TTC GAT GAT AGT

CAG CTT GAT CGT TTA GTG CCA AAA CAG GCG GAA AGC GGC GTT TCC CGC CCG

GCT CCG CAG CTA AAA CGC ACG ACC ATG CGT ATA CTG ATA GGA TTA CTG GTG

CAA AAC CCG GAT CTC GCG CCG TTA GTG CCG CCC TTA GAC GCG CTG GAT CAG

AAT AAG CTG CCT GGA CTT GGC TTA TTT AAA GAA TTG GTC AAA ACT TGT TTG

GCT CAG CCA GGT CTT ACT ACC GGA CAA CTT CTG GAA CTC TAC CGT GGC ACA

AAT GAT GCT GCG ACC CTT GAA AAA TTA TCG ATG TGG GAC GAT ATA GCA GAT

AAG GCG ATT GCC GAA AAG ACC TTT ACC GAC TCA CTC AAC CAT ATG TTT GAT

TCG CTG CTG CAA CTG CGA CAA GAA GAG CTG ATC GCT CGC GAT CGC ACT CAC

GGT TTA AGC AGC GAA GAA CGC CGA GAG CTC TGG ACG TTA AAC CAG GAG CTG

GCC AGA AAA TGA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

S. typhimurium rpsU - dnaG sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.