prpB - prpC sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG TCT CTA CAC TCT CCA GGT AAA GCG TTT CGC GCT GCA CTG ACT AAA GAA

AAT CCA TTG CAG ATT GTT GGC ACC ATC AAC GCT AAT CAT GCG CTG TTG GCG

CAG CGT GCC GGA TAT CAG GCA ATT TAT CTT TCT GGC GGT GGC GTG GCG GCA

GGT TCG CTG GGG CTG CCC GAT CTC GGT ATT TCT ACC CTT GAT GAT GTG CTG

ACC GAC ATT CGC CGT ATC ACC GAC GTT TGT TCG CTG CCG CTG CTG GTG GAT

GCG GAT ATC GGT TTT GGT TCT TCG GCC TTT AAC GTG GCG CGC ACC GTG AAA

TCG ATG ATT AAA GCC GGT GCG GCA GGA TTG CAT ATT GAA GAT CAG GTT GGT

GCG AAA CGC TGC GGT CAT CGT CCG AAT AAA GCG ATC GTC TCG AAA GAA GAG

ATG GTG GAT CGG ATC CGC GCG GCG GTG GAT GCG AAA ACC GAT CCT GAT TTT

GTG ATC ATG GCG CGC ACC GAT GCT CTG GCG GTA GAG GGG CTG GAT GCG GCG

ATC GAG CGT GCG CAG GCC TAT GTT GAA GCG GGT GCC GAG ATG TTG TTC CCG

GAG GCG ATT ACC GAA CTC GCC ATG TAC CGC CAG TTT GCC GAT GCG GTG CAG

GTG CCG ATC CTC GCC AAC ATC ACC GAA TTT GGT GCC ACG CCG CTG TTT ACC

ACC GAC GAA TTA CGC AGC GCC CAT GTC GCA ATG GCG CTG TAC CCA CTT TCA

GCG TTC CGC GCC ATG AAC CGC GCC GCT GAA CAT GTC TAC AAC GTC CTG CGC

CAG GAA GGC ACG CAG AAA AGC GTC ATC GAC ACC ATG CAG ACC CGC AAC GAG

CTG TAC GAA AGC ATC AAC TAC TAC CAG TAC GAA GAG AAG CTC GAC AAC CTG

TTT GCC CGT AGC CAG GTG AAA TAA

AAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCA

GGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACC

GATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC

GGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTA

TCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACA

ACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAG

GTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAAT

GACGAGGACAAC

ATG AGC GAC ACA ACG ATC CTG CAA AAC AGT ACC CAT GTC ATT AAA CCG AAA

AAA TCT GTG GCA CTT TCT GGC GTT CCG GCG GGC AAT ACG GCG CTC TGC ACC

GTG GGT AAA AGT GGC AAT GAC CTG CAT TAC CGC GGC TAC GAT ATT CTT GAT

CTG GCG AAA CAT TGC GAA TTT GAA GAA GTG GCG CAT CTG CTG ATC CAC GGC

AAA CTG CCG ACC CGT GAC GAA CTC GCC GCT TAC AAA ACG AAA CTG AAA GCC

CTG CGC GGT TTA CCG GCT AAC GTG CGT ACC GTG CTG GAA GCC TTA CCG GCG

GCG TCG CAC CCG ATG GAT GTT ATG CGC ACC GGT GTT TCC GCG CTC GGC TGC

ACG CTG CCA GAA AAA GAG GGG CAT ACC GTC TCT GGC GCG CGG GAT ATT GCC

GAC AAA CTG CTG GCG TCG CTT AGC TCG ATT CTC CTT TAT TGG TAT CAC TAC

AGC CAC AAC GGC GAA CGC ATC CAA CCG GAA ACC GAT GAC GAC TCC ATC GGC

GGT CAC TTC CTG CAT CTG CTG CAC GGC GAA AAG CCA TCG CAA AGC TGG GAA

AAG GCG ATG CAT ATC TCG CTG GTG CTG TAC GCC GAA CAC GAG TTT AAC GCC

TCC ACC TTT ACC AGT CGG GTG ATT GCG GGC ACC GGC TCT GAT ATG TAT TCC

GCG ATT ATT GGC GCG ATT GGC GCA CTG CGC GGG CCA AAA CAC GGC GGG GCG

AAT GAA GTG TCG CTG GAG ATC CAG CAA CGC TAC GAA ACG CCG GAC GAA GCC

GAA GCA GAT ATC CGC AAG CGC GTG GAA AAC AAA GAA GTG GTC ATT GGT TTT

GGT CAT CCG GTT TAC ACC ATC GCT GAC CCG CGC CAC CAG GTG ATT AAA CGT

GTG GCG AAG CAG CTC TCG CAG GAA GGC GGC TCG CTG AAG ATG TAC AAC ATC

GCC GAT CGC CTG GAA ACG GTG ATG TGG GAG AGC AAA AAG ATG TTC CCC AAT

CTC GAC TGG TTC TCT GCT GTT TCC TAC AAC ATG ATG GGC GTT CCC ACC GAG

ATG TTC ACA CCA CTG TTT GTT ATC GCC CGC GTC ACC GGC TGG GCG GCG CAC

ATT ATC GAA CAA CGT CAG GAC AAC AAA ATT ATC CGT CCT TCC GCC AAT TAT

GTT GGA CCG GAA GAC CGC CCG TTT GTC GCG CTG GAT AAG CGC CAG TAA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

prpB - prpC sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.