ppc - argE sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

TTA GCC GGT ATT ACG CAT ACC TGC CGC AAT CCC GGC AAT AGT GAC CAT TAA

CGC TTG TTC GAC GCG AGG ATC CGG TTC CTG GCC TTC TTT TTC TGC CTG GCG

GGA GCG GTG CAG CAA CTC GGC CTG CAA TAC GTT CAG CGG GTC GGT GTA AAT

ATT CCG TAG CTG AAT AGA CTC TGC AAT CCA CGG CAG ATC GGC CAT CAG ATG

GGA ATC GTT GGC AAT CGC CAG CAC CAC TTT GAT GTC TTC TTC TTG CAG GTT

GCG TAA CTC TTT ACC TAA CGG CCA CAG TGC TTT GTC TAC CAG GCG TTG GTC

ATA GTA TTC CGC CAG CCA CAG GTC TGC TTT GGC GAA GAC CAT CTC CAG CAT

GCC GAG ACG CGT CGA GAA GAA TGG CCA ATC GCG GCA CAT AGC CTC CAG CTC

GCT CTG TTT GCC GTC TTC GAC CAC TTT TTG CAG CGC CGT ACC TGC ACC CAG

CCA GGC GGG GAG CAT CAG ACG GTT TTG CGT CCA GGC GAA GAT CCA CGG AAT

GGC GCG TAG TGA CTC GAC GCC GCC GGT TGG GCG ACG TTT CGC CGG ACG TGA

ACC CAA CGG CAG TTT GCC CAG TTC TTG TTC CGG CGT AGC GGA GCG GAA GTA

AGG CAC AAA ATC TTT GTT TTC ACG TAC GTA GCC GCG GTA GAC ATC GCA GGA

GAT GAC TGA CAG TTC ATC CAT AAT GCG ACG CCA GCT CTC TTT CGG CTC CGG

CGG TGG CAG CAG GTT GGC TTC CAG AAT CGC CCC GGT ATA AAG CGA CAG GCT

GCT GAC GGT GAT TTC TGG CAG ACC ATA TTT AAA GCG GAT CAT CTC GCC CTG

TTC GGT TAC GCG CAG GCC GCC TTT CAG GCT TCC TGG CGG TTG TGA CAG CAG

CGC CGC ATG AGC AGG TGC GCC GCC GCG ACC AAT GGA ACC GCC GCG ACC GTG

GAA CAA CGT CAG CTC AAT ACC CGC TTT TTC GCA GGT TTT GAT TAA TGC ATC

CTG TGC CTG ATA TTG CGC CCA GGA AGC TGC CAT CAC TCC CGC ATC TTT TGC

TGA GTC GGA ATA GCC AAT CAT CAC CAT CTG TTT GCC CTG AAT CAG GCC ACG

ATA CCA GTC AAT ATT GAG CAG CTG GGT CAT GAC ATC GTT GGC GTT GTT CAG

ATC ATC GAG GGT TTC AAA CAG CGG AGC AAC CGG CAT CGC AAA CCC GAT ACC

CGC TTC TTT CAG CAG CAG GTG GAC AGC CAG TAC GTC GGA CGG CGT TTT CGC

CAT CGA GAT CAC GTA GGC GGC AAT GGA GCC TTG CGG TGC TTC GGC AAT CAC

CTG GCA GGT ATC GAG CAC TTC GCG CGT TTC GGC GCT TGG TTG CCA GTT GCG

CGG CAG AAG CGG ACG TTT GGA GTT CAG TTC GCG GAT CAG GAA CGC CTG TTT

GTC GGC CTC TGA CCA GCT TTC GTA GTC GCC GAT ACC GAG GTA GCG GGT CAG

CTC GCC CAG CGC TTC GGT ATG ACG CGT GCT CTC CTG ACG GAT ATC AAT ACG

GAC CAG CGG TAC GCC GAA ACA TTT CAC GCG GCG CAG GGT GTC GAG CAG ATC

GCC GTT GGC GAT AAT ACC CAT GCC ACA CGC CTG AAG TGA CTG GTA GCA AGC

GTA GAG CGG TTC CCA CAG TTC TTC GTT TTG TGT CAG CAG GCC TTC TGG TTT

TGG CAG TTC TTC GCC TTT CAG GCG CGC TTC CAG CCA TGC CTG TGT CGC CAT

CAG GCG AGA ACG CAG GTT TTT CAT CAG ATA GCG ATA CGG TTC TGC GGC ACC

TTC TTC GCC AAC CAG CGC CAG CAG TTC AGG GGT CGC TTC AAC CAT CGA CAG

TTC AGA AAC CAG CAC CTG AAT ATC TTT CAG GAA CAA ATC GGT GGC TTT CCA

GCG GCT GAG TAG CAG GAC GTG GCG GGT GAT ATC GGC AGT GAC GTT CGG GTT

GCC GTC GCG GTC GCC GCC CAT CCA CGA AGT AAA ACG GAC CGG AAC AAA TTC

GAC GGG CAG TTT GTA GCC GAG GTT CTC TTC CAG TTG TTC GTT CAG TTC GCG

CAG GTA ATT TGG TAC GCC TTG CCA CAG GCT GTT TTC CAC TAC GGC AAA GCC

CCA TTT GGC TTC ATC TAC CGG GCT TGG ACG CAG CTT ACG GAT TTC ATC GGT

ATG CCA TGA CTG GGC GAT CAA CTG GCG CAG GCG ACG CAT CAG CTG GTT GTG

TTC GTA GTC AGC GAT ATC TTT GTT ATC GAG CTG TTT TAA ACA GGC GTT CAC

TTC CAC CAT TTT GTG GAT CAG TGT ACG ACG GGT AAT TTC GGT TGG GTG AGC

CGT GAG GAC CAG TTC CAG CGA CAG CGA TTC CAC TGC TTT TTT GAT GGT GTC

TTC GCT CAG TTC CGG CTG GTT TTT CAG TTT ACG CAG GGT GCG GGC GAT CAC

TTC CGG GTT GCT GGC AGC TTC GCC TTT CGG CGA AAT GCT GTG GTA TTG CTC

GGC GGT GTT GGC CAG GTT CAG GAA CTG ACT AAA CGC ACG CGC AAC GGG CAG

CAG CTC GTC GTT CGA CAA ATT TTG TAA GGT GGT GAG CAA CTC CTG GCG GTT

AGC ATC ATT GCC AGC GCG TGA AGA TTT CGA CAA CTT ACG GAT AGT TTC TAC

GCG TTC AAG AAT GTG TTC TCC CAA CGC ATC CTT GAT GGT TTC TCC CAG CAC

TTT GCC GAG CAT ACT GAC ATT ACT ACG CAA TGC GGA ATA TTG TTC GTT CAT

ATTACCCCAGACACCCCATCTTATCGTTTGATAGCCCTGTATCCTTCACGTCGCATTGGCG

CGAATATGCTCGGGCTTTGCTTTTCGTCGTCTTTTATAAAGCCACGTAAAAGCGGTGACGT

CAAATGCTGCGAAATCGCTTCAGCAAACGAATAAATAGCAGGAATTTACGTCATTAAATTC

ACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCCCAAGTAACACCAA

AGGTGTAGGTCGGATAAGATGCGCAAGTATCGCATCCGACATTATTGCGGCACTGGAGTTT

GGCAACAGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAGTTGGGCATCGTTTGAG

TCACTGTCGGTCGGATAAGATGCGCAAGTATCGCATCCGACATTATTGCGGCACTGGAGTT

TGGCAACAGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGTTGGGCATCGTTTGA

GTCACTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACTGGAGT

TTGGCAACAGCGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGTT

TTA ATG CCA GCA AAA ATG GTG AAT TAC CTG GGT TAT CAG TTC GCG GGT GGG

CTT GAT AAA CCG TGT TTC CAG ATA TTC ATC AGG TTG ATG AGC CTG ATT AAT

TGA GCC AGG CCC CAA CAC CAG CGT CGG GCA TAA CGT TTG AAT AAA CGG CGC

TTC GGT ACA GTA GTT CAC CAC TTC GGT TTT TGC TCC GAG CAA TTT CTC AAC

CAC TTC AAC CAG TTG ATG ATT CGG TGG GCA TTC ATA GCC AGG GAT CGG CGG

ATG CAG CTC GTC GAC CGT CAG ACG ACC CGG CCA GCG TTC GCT CAC CGG AGC

CAA TGC ATC GTT GAG CAA ACC ATT AAG TTC ATT GAG TGT CAT GCC AGG CAG

CGG ACG AAT ATC CAT ATG CAA CTC ACA GCA AGC GCA AAT ACG GTT AGA AGC

GTC GCC ACC GTG AAT ATG CCC GAG GTT GAG CGT AGG GTA TGG CAC GGT AAA

CGC TTC GTA GTG ATA ACG TTC TTT CAG GTT ATC GCG CAA TTG CAA AAT ATG

CCC GAT GGC GTC GTG CAT TAG TTC GAT AGC GTT AAC TCC GCG TGC TGG ATC

GCT GGA GTG CCC CGA CTG GCC CTG AAT ACG GAT GGC GTT AGA GAT ATG ACC

TTT ATG TGC GCG TAC CGG TTG TAG TGA CGT CGG TTC GCC AAT GAT GGC GCA

ATC CGG GCG CAG GGC GGT AGT TTC GGC AAA ATA ACG CGC TCC GGC CAT ACT

GGT TTC TTC ATC AGC AGT CGC CAG AAT GTA GAG CGG TTT TTT CAG TTT CGT

GAC GTC GAC ATC GCG TAG CGC ATC AAG GAT AAA CGC AAA AAA GCC TTT CAT

GTC GGC GGT GCC TAA GCC GTA AAG CTT GCC GTC ATG CTC CGT CAG TGT AAA

CGG ATC GCG CGT CCA GCG ACC GTC ATC AAA TGG CAC CGT ATC GGT ATG CCC

CGC CAG CAA CAA GCC GCC AGC CCC CTG TCC GAT ACT TGC CAG CAT ATT GAA

TTT GTT GCG AGT TCC TGG AAC AGG CTG CAC TTC CAC ATT GAA GCC CAA ATC

TTT AAA CCA GTC CGC CAG CAG AGT GAT TAA ATC TGC ATT GCT TTG ATC GAG

TGC CTC TTC CGT GGC GCT TAT TGA AGG TGT GGC AAT CAG AGC GCG GTA AAT

CTC GAT AAA TGG CGG TAA TTT GTT TTT CAT

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

ppc - argE sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.