pfkA - sbp sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
Direct repeats bracketing BIMEs are underlined.

ATG ATT AAG AAA ATC GGT GTG TTG ACA AGC GGC GGT GAT GCG CCA GGC ATG

AAC GCC GCA ATT CGC GGG GTT GTT CGT TCT GCG CTG ACA GAA GGT CTG GAA

GTA ATG GGT ATT TAT GAC GGC TAT CTG GGT CTG TAT GAA GAC CGT ATG GTA

CAG CTA GAC CGT TAC AGC GTG TCT GAC ATG ATC AAC CGT GGC GGT ACG TTC

CTC GGT TCT GCG CGT TTC CCG GAA TTC CGC GAC GAG AAC ATC CGC GCC GTG

GCT ATC GAA AAC CTG AAA AAA CGT GGT ATC GAC GCG CTG GTG GTT ATC GGC

GGT GAC GGT TCC TAC ATG GGT GCA ATG CGT CTG ACC GAA ATG GGC TTC CCG

TGC ATC GGT CTG CCG GGC ACT ATC GAC AAC GAC ATC AAA GGC ACT GAC TAC

ACT ATC GGT TTC TTC ACT GCG CTG AGC ACC GTT GTA GAA GCG ATC GAC CGT

CTG CGT GAC ACC TCT TCT TCT CAC CAG CGT ATT TCC GTG GTG GAA GTG ATG

GGC CGT TAT TGT GGA GAT CTG ACG TTG GCT GCG GCC ATT GCC GGT GGC TGT

GAA TTC GTT GTG GTT CCG GAA GTT GAA TTC AGC CGT GAA GAC CTG GTA AAC

GAA ATC AAA GCG GGT ATC GCG AAA GGT AAA AAA CAC GCG ATC GTG GCG ATT

ACC GAA CAT ATG TGT GAT GTT GAC GAA CTG GCG CAT TTC ATC GAG AAA GAA

ACC GGT CGT GAA ACC CGC GCA ACT GTG CTG GGC CAC ATC CAG CGC GGT GGT

TCT CCG GTG CCT TAC GAC CGT ATT CTG GCT TCC CGT ATG GGC GCT TAC GCT

ATC GAT CTG CTG CTG GCA GGT TAC GGC GGT CGT TGT GTA GGT ATC CAG AAC

GAA CAG CTG GTT CAC CAC GAC ATC ATC GAC GCT ATC GAA AAC ATG AAG CGT

CCG TTC AAA GGT GAC TGG CTG GAC TGC GCG AAA AAA CTG TAT TAA

TGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTG

ATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGT

AGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATAT

GAGGCGGATTTCTTCCGCCTTTTTAATCCCTCAACATATACCCGCAAGTTATAGCCAATCT

TTTTTTATTCTTTAATGTTTGGTTAACCTTCTGGCACGCTTTGCTCATCACAACACAACAT

AAGAGAGTCGGGCG

ATG AAC AAG TGG GGC GTA GGG TTA ACA TTT TTG CTG GCG GCA ACC AGC GTT

ATG GCA AAG GAT ATT CAG CTT CTT AAC GTT TCA TAT GAT CCA ACG CGC GAA

TTG TAC GAA CAG TAC AAC AAG GCA TTC AGC GCC CAC TGG AAA CAG CAA ACT

GGT GAT AAC GTG GTG ATT CGT CAG TCA CAC GGT GGC TCA GGT AAA CAA GCG

ACG TCG GTA ATC AAC GGT ATT GAA GCT GAT GTT GTC ACG CTG GCT CTG GCC

TAT GAC GTG GAC GCA ATT GCG GAA CGC GGG CGG ATT GAT AAA GAG TGG ATC

AAA CGT CTG CCG GAT AAC TCC GCA CCG TAC ACT TCC ACC ATT GTT TTC CTG

GTA CGT AAG GGA AAT CCG AAG CAG ATC CAT GAC TGG AAC GAT CTG ATT AAA

CCG GGT GTT TCG GTG ATC ACG CCT AAT CCG AAA AGC TCT GGT GGC GCG CGC

TGG AAC TAC CTG GCA GCC TGG GGC TAC GCG CTG CAT CAC AAC AAC AAC GAT

CAG GCA AAA GCA CAG GAT TTT GTT CGG GCA CTG TAT AAA AAC GTC GAA GTT

CTG GAT TCT GGC GCG CGT GGC TCC ACT AAC ACT TTT GTC GAG CGC GGA ATT

GGC GAT GTA CTG ATT GCC TGG GAA AAC GAA GCT CTG CTG GCA GCG AAT GAA

CTG GGG AAA GAT AAA TTC GAA ATC GTC ACG CCG AGT GAG TCT ATC CTC GCA

GAG CCA ACC GTG TCG GTG GTC GAT AAA GTG GTC GAG AAA AAA GGT ACT AAA

GAG GTG GCG GAA GCC TAC CTG AAA TAT CTC TAC TCG CCA GAA GGT CAG GAA

ATT GCC GCG AAA AAC TAC TAC CGT CCG CGC GAC GCT GAG GTG GCG AAA AAG

TAC GAA AAT GCG TTT CCA AAG CTG AAG TTA TTC ACC ATT GAT GAA GAG TTC

GGC GGC TGG ACG AAA GCG CAA AAA GAG CAT TTT GCT AAC GGC GGT ACG TTC

GAT CAG ATC AGC AAA CGC TGA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

pfkA - sbp sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats. Direct repeats bracketing BIMEs are underlined.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
Direct repeats bracketing BIMEs are underlined.