E. coli strain 172 orf30-orfsequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATGCTTAATGGAATTAGTAACGCTGTTTCTACAATAGGGCTGCATCTTAGA
GGTGTCGCAAGTCGAGTGGGCTCTGCGGGGGTATCTGGATTTTCTGTAGCC
CCTCAGACTGTGCGTCTTACTCCGGTGAGATTTCATTCCCCTTTTTCTCCA
GGTTCGTCGAATATTAATGCGAGAACGACTTTTAATATGAGTCATATGAGT
CAGATGAGTCAGATGAGTCGTATGAGTCAGATGGCGACTTCATTTACTCCT
ACTCGCCCGGCACCACCGCCACCGACAAGTGGACAGGCATCCGAGTCTGGT
GGACTACCGCCCATTGCACAGGCATTAAAAGATCATTTAGCTGCCTATGAA
CTATCGAAAGCGTCTGAGACTGTAAGCTTTAAGCCAACCCGTCAGGCACCC
CCGCCACCAACAAGTGGACAGGCATCCGAGTCTGGTGGACTACCGCCCATT
GCACAGGCATTAAAAGATCATTTAGCTGCCTATGAGCAATCGAAAAAAGTA
TAA
TCAACTAATTTAAAACGATTAACCGGTGTTGATTATTTATTTGCCAACTAATAAAAGCCGA
TATCAAACTGTGTAGTAATATACTCGTCATACTTCAAGTTGCATGTGTTGCGACTGCGTTC
GCTCCCCCCAGTCACTTACTTATGTAAGCTTCTGGGGGTTCACTCGCTTGCCACCTTCCTG
CAATTCGAATTATTTAGAGTATAAATATAATTAGTAATATCGGTTTTTATTGGGGGGATTG
TAATTAATAATGTATTATTATACGGTGAAAGTGGAGAAAGGGGCGTTTTGTTAAAAGCGCA
CATAGCTCAAAAGTCTGTTCGCTATTGATTGTGATAATCTGAAAGGCTGTAAACTCAGGTG
TACTGGCAATAGCGGACACAACCATTTGTTCTTTTTTTACGCAGTTATCTGATAATATTTT
CCTGAAGGCTGCCGGGGAGATATGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAG
TAAACTCTCAGTCAGAGGTGACTCAC
ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCT
GAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCC
GCAGCCCGTGAACTCAGCCTGTATGAATCACAGCTCTACAACTGGCGCAGT
AAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACC
GAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCT
ATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Back to the table of contents

Please send questions and comments to Sophie.Bachellier@pasteur.fr.