o483 - f556 sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG AAA ACA TGT TGG CAA ATC CTC GAA ATT GAA AGC ACG ACG CAA ATA GAC

ATT ATC CGC CAG GCT TAT CTT GCT CGC TTA CCG TTG TGT CAT CCC GAA ACC

GAT CCG CAA GGG TTT AAA GCA TTA CGC CAG GCC TAT GAA GAG GCC CTG CGA

CTG GCG GTA AAT CCT GTC GAG GAA GCA GAT GAT GAA GAA AAA GAT GCT GCC

GCT GAA CAT GAA ATA CTA CGT GCA TTC AGG ACA TTA CTG GAT TCA GAA AGT

GAT CGT TTT CAG CCT TCC GCC TGG CAG AAA TTT ATT CAG CAA TTA AAT ACC

TGG AAC ATG GAG GAT GTC GAT CAA TTA CGC TGG CCG CTG TGT GCA ATC GCC

ATA GAA GCG CGA TAT CTT TCA TTA AAT TGT GCT TCT TTG CTG GCA GAG CGT

TTG AAC TGG CAT TCA TTT AAT GAC AGC GAA GGA ATG GAT GAG GAA GAA AGG

GAG GCT TTT CTT GAG GCC ATT CAG GCT GGT GAT TGT TTC GAT TTC CTT AGC

CTT CTG GAA TAT CCC ATT GCG TTG CAG AAC CAG ACT GTT GAG TAT TAC TTC

GCG CTG GAA CGT TGC TGC CGT TAC CAT CCT GAC TAT GTC ACT GCG TTT TTG

GCG ATG GAA GGT CCG TGG TTA ATT CCT GAT GAT GCA AAG TTA CAT CGC AAA

CTG TTG CGC TGG TAC AGC TCG GTG CAA ACA GGT ATG GCG GAA CTC ATT CCT

GTC GCT CAA CAG TGG CAA ACG GAA GAA CCA GAA AGC GAA GAT GCC CGG TAT

TAC TTG TGT GCA CAA CGT TTG TAC TGC GGC GAG GGG GAA AGC CTG CTT GCC

GAT CTC TGC GCG TAC TGG GAA AGT TAC CCA TCT ACA CAA GCT GAT AAT TTG

TTG TTG CAG TGG AGC AAG CGT CAT TGC CCG GAT TAT TTC GCG TTA TTA GTG

ATG GTT ATC GAA GCG CGG AGC ATG GTA GAT GCG CAA GGT CAA CCG CTG AAA

TAT GTT CCT GGT GAG AGC GCC CGG ACG CGG CTG TTA TGG GCG GAG ATT TTA

CAT AGC GGA AAA TTA TCG CCG TTA GGT CAA TCG TTT ATT GAG TCG TTA TTC

TTC AAG CGC AAA GCA TGG GCG TGG TGG AAA TCG AGA GTC GGT AGC GAG ACA

GAG CAA GAT TCA CCG TTC CTG GAT TTG TAT CGG GTA GCG GAA CAG GTA GTA

CTT GAA GCG TTT CCG AAA CAA GAG ATG CTG GCC CGT CTT AAT ACA AGG CTG

GAA GGC GGA GAT GCT CAT CCA TTA GAG GCC ATT GTC ACC CGG ATG CTT TTG

ACG AAA GTG AAA CTC GAG CCG GAG GAT GAA GAT GTC GAT GAG CCA ACA CCT

GAA AAT CAT GAA GAA AAA AAT GAT GAG GGT GAA AAA CCA CAG AGC ATT ACC

AGC ATT ATC AAA ATC AGT TTA ACG GTG CTG GTG ATA GGT TAT GCT CTC GGC

AAA ATC GCG ATG TTG TTT AGC TGA

CGATGTGTTTTTTGCGCCGATGCCGGATGCAGCGTTTACGCCGCATCCGGCAGCCGTGT

TTA TGG GAT CTC AAT GGC TAA ATA ATC GCT CGC CCG CCG CCG AAC TTC ATC

CAC GCG GGC CAT ATC GTT TGA CTG CAA CGC CGC ATC AAA ATC GGT GAT CAC

CCG GCC GAT CTC TTC TCG CTC GTC ACC CAG CGC CCG CGC CCA CAA CTC TTC

CAG TTT GGC TTT AAA GGT GCG ATT GAT GAG CAT ATC GCG CGG ATA AAT TTT

CAA TGC GGA TAA CCG CGT CCG ACT CTC TTC AAT CTG CTG CGC GCT CAA TGT

TAC CGG GCT GTG GTT AAT CAC TCT GGA CTT AAC GCT GCC GTC TTC CAG AAG

CAC GTC AAC TTC AAG CAA CCC GTT GAT ATC ATA ACT AAA GCG AAT ATC AAT

CGA CTG ATA AGC CCC GGT TTT CTT CAA CGG CAC ATC GAA GGA TTC CAC CAG

AAT GTT GTT TTT AAC TTT GTG GTT TTC TCC CTG ATA GAC GTT AAC CGT AAT

TGA ATC CTG TTC CGG GTG CAT GGT TGA ATA AGT TTC TAC ACG CGA CAC GGG

CAC AGT GGT GTT TCG TTC AAT AAT CGG CGA GAA AAT GCC GGA AAC GCC CTG

GCG GTT AAC TTC AAC GCC CAA CGA GTA AGG GCA AAT ATC AGT GAG GAT TAC

CTC TTC AAT ATC TTC ACT GCG TAA GCG GCA GGC GGC CTG GAT TGC TGC GCC

CAG CGC GAC AAT GGT GCT CGG ATC GTA ACT TTG ATA CGG TAA TTT GCC AAA

CAG ACG CAC GGC GAT TCG CTG CAC CAG CGG CAT TTG TGA CGC GCC GCC AAC

CAG CAC CAG ACT GTC GAT TTG ACT CGG CTT CAG ACG CGC ATC GCG CAA CGC

CTG TTC AAT CGG CAC TCG CAA GCG ATT GAG CAG CGG CAA CCA CAA ATC TTC

CAG TTC GTT CTC GTA AAA TTC GCA TTC CCG CGT TTC TTC CTG ATA CTG CCA

GCG AAT GTG CAA TGG CGA TTG ATT GCT ACA TTT TGC CGC TTC CAC ACA GGC

GTA CAA GGC TGC CAG TTC ACT CTC GTT AAG CGT GGT CCT GGC GAC ATC CGC

GCG TTT TAA AAC CTC ATC GAC CAG CAT ATG GGT AAA ATC TTC GCC ACC AAG

AAA GTT GTC GCC AGC GGA GGC GTG AAC TTC AAT CAC CGG CGT GGC GTA CTC

AAG CAC CGT AAC GTC AAA CGT GCC GCC ACC GAG ATC AAA CAC CAG CGA ACG

GGT ATT TTG TTG GGT ATG CAG GCC ATA CGC CAT CGC AGC TGC TGT GGG TTC

ATT AAT TAA GCG TAC CGC ATT TAA CCC GGC TAA CTC CGC TGC TAA ACG GGT

ATG CTT GCG TTG TTC ATC GCT GAA ATA AGC CGG AAC GGA GAT CAC CAC ATC

TTT AAT CGG ACG TTG CAG AAA TTC TTC GGC ATC TTC TTT TAA TGA GCG TAA

TAC CAA AGA GGA CAG TTC TGG CGC GTT AAA TGT GTC GCT GCC TAA CCG CCA

GTT GGT ATT ACT GCC CAT TGC ACG TTT AAA TAA CGC TGC CGT TTT ATC CGG

ATG CGA AGT ACG CCG TGA TAC AGC CGG TTT TCC GAC TAA AAT ATG ATT ATT

TTC ATC CAT GCT AAT TAT GGA TGG TGT TAA ATA TTC ACC GAA CTT ATT TGG

AAT TAA TTG CGC GGC ACC GTC TTT CCA GAC GGC AAT TAA ACT ATT GGT AGT

ACC GAG ATC GAT ACC AAT GGC GAG TTC TGC ATT ATC CAT

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

o483 - f556 sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.