cusC - o110 sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | TCT | CCT | TGT | AAA | CTT | CTG | CCA | TTT | TGT | GTG | GCC | CTT | GCG | CTA | ACC | GGT | |
| TGT | TCA | CTG | GCA | CCG | GAT | TAT | CAG | CGT | CCG | GCA | ATG | CCC | GTG | CCG | CAG | CAG | |
| TTC | TCA | CTC | AGC | CAG | AAC | GGC | CTG | GTT | AAC | GCA | GCA | GAT | AAC | TAT | CAG | AAC | |
| GCG | GGC | TGG | CGC | ACC | TTT | TTT | GTT | GAT | AAT | CAG | GTG | AAG | ACG | CTG | ATT | AGC | |
| GAG | GCG | CTG | GTG | AAT | AAT | CGG | GAT | TTG | CGC | ATG | GCG | ACG | CTG | AAA | GTG | CAG | |
| GAG | GCA | CGG | GCG | CAA | TAT | CGT | CTG | ACC | GAT | GCC | GAC | CGC | TAC | CCA | CAG | CTC | |
| AAT | GGC | GAG | GGC | AGC | GGC | AGC | TGG | AGC | GGT | AAT | CTT | AAA | GGG | AAT | ACC | GCC | |
| ACG | ACA | CGG | GAG | TTT | TCG | ACC | GGC | CTT | AAC | GCC | AGC | TTT | GAC | CTC | GAT | TTT | |
| TTC | GGT | CGC | TTA | AAG | AAC | ATG | AGC | GAA | GCC | GAG | CGA | CAA | AAT | TAT | TTA | GCC | |
| ACT | GAG | GAA | GCT | CAG | CGC | GCG | GTG | CAT | ATT | CTG | CTG | GTT | TCT | AAT | GTC | GCG | |
| CAA | AGC | TAT | TTC | AAT | CAG | CAA | CTG | GCG | TAT | GCG | CAA | TTG | CAA | ATA | GCC | GAA | |
| GAA | ACG | CTG | CGT | AAT | TAT | CAG | CAG | TCA | TAT | GCG | TTT | GTC | GAA | AAA | CAA | CTG | |
| TTG | ACA | GGT | AGC | AGT | AAT | GTT | CTG | GCG | CTG | GAA | CAG | GCT | CGC | GGG | GTG | ATA | |
| GAA | AGT | ACC | CGC | AGC | GAC | ATC | GCT | AAA | CGT | CAG | GGG | GAA | CTG | GCG | CAG | GCG | |
| AAT | AAT | GCA | TTG | CAA | CTG | TTG | CTG | GGA | AGC | TAC | GGC | AAG | CTG | CCG | CAA | GCG | |
| CAG | ACA | GTA | AAC | AGC | GAC | AGC | CTG | CAA | AGC | GTT | AAA | TTA | CCG | GCG | GGA | TTG | |
| TCG | TCG | CAA | ATC | TTA | TTG | CAG | CGC | CCG | GAT | ATT | ATG | GAA | GCT | GAA | CAC | GCG | |
| TTA | ATG | GCG | GCT | AAT | GCC | AAT | ATT | GGC | GCT | GCA | CGC | GCG | GCA | TTT | TTT | CCG | |
| TCT | ATA | AGC | CTG | ACC | AGC | GGA | ATA | TCG | ACC | GCC | AGT | AGC | GAT | CTA | TCG | TCA | |
| TTA | TTT | AAC | GCC | AGC | AGC | GGG | ATG | TGG | AAT | TTT | ATA | CCC | AAA | ATT | GAG | ATC | |
| CCC | ATT | TTT | AAT | GCC | GGA | CGC | AAC | CAG | GCC | AAT | CTG | GAT | ATC | GCC | GAA | ATT | |
| CGC | CAG | CAG | CAG | TCG | GTG | GTG | AAT | TAT | GAA | CAG | AAA | ATC | CAG | AAC | GCC | TTT | |
| AAA | GAA | GTG | GCA | GAT | GCG | CTG | GCA | TTA | CGT | CAA | AGC | CTG | AAC | GAT | CAA | ATT | |
| AGC | GCC | CAG | CAG | CGT | TAT | CTG | GCA | TCG | CTG | CAA | ATT | ACT | TTG | CAA | CGG | GCG | |
| CGG | GCA | TTA | TAT | CAG | CAC | GGC | GCA | GTA | AGT | TAT | CTG | GAA | GTG | CTG | GAT | GCC | |
| GAG | CGT | TCT | TTA | TTT | GCA | ACC | CGA | CAA | ACT | TTA | CTT | GAT | CTG | AAT | TAT | GCC | |
| CGT | CAG | GTT | AAC | GAA | ATT | TCT | TTG | TAT | ACC | GCA | CTT | GGT | GGC | GGT | TGA |
|
| CAGCAATATACTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGT |
| CACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTA |
| TTTAGAGTATGACTTTTAACTCCAGGAGAGAATAA
|
| ATG | AAA | AAA | GCA | CTG | CAA | GTC | GCA | ATG | TTC | AGT | CTG | TTT | ACC | GTT | ATT | GGC | |
| TTT | AAT | GCC | CAG | GCT | AAC | GAA | CAT | CAT | CAT | GAA | ACC | ATG | AGC | GAA | GCA | CAA | |
| CCA | CAG | GTT | ATT | AGC | GCC | ACT | GGC | GTG | GTA | AAG | GGT | ATC | GAT | CTG | GAA | AGC | |
| AAA | AAA | ATC | ACC | ATC | CAT | CAC | GAT | CCG | ATT | GCT | GCC | GTG | AAC | TGG | CCG | GAG | |
| ATG | ACC | ATG | CGC | TTT | ACC | ATC | ACC | CCG | CAG | ACG | AAA | ATG | AGT | GAA | ATT | AAA | |
| ACC | GGC | GAC | AAA | GTG | GCG | TTT | AAT | TTT | GTC | CAG | CAG | GGC | AAC | CTT | TCT | TTA | |
| TTA | CAG | GAT | ATT | AAA | GTC | AGC | CAG | TAA |
|
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