mpl - yjgA sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | CGC | ATT | CAT | ATT | TTA | GGA | ATT | TGT | GGC | ACA | TTT | ATG | GGC | GGT | CTG | GCG | |
| ATG | CTG | GCG | CGC | CAG | TTA | GGC | CAT | GAA | GTA | ACG | GGT | TCG | GAC | GCC | AAT | GTG | |
| TAT | CCG | CCG | ATG | AGC | ACC | TTA | CTT | GAG | AAG | CAA | GGC | ATT | GAG | CTG | ATT | CAG | |
| GGG | TAC | GAT | GCC | AGC | CAG | CTC | GAG | CCG | CAG | CCG | GAT | CTG | GTG | ATT | ATT | GGC | |
| AAC | GCC | ATG | ACC | CGT | GGA | AAT | CCG | TGT | GTG | GAA | GCG | GTA | CTG | GAA | AAA | AAT | |
| ATC | CCT | TAT | ATG | TCA | GGT | CCA | CAG | TGG | CTG | CAC | GAT | TTT | GTG | CTG | CGC | GAC | |
| CGC | TGG | GTG | CTG | GCC | GTT | GCC | GGT | ACA | CAC | GGC | AAA | ACC | ACC | ACC | GCG | GGA | |
| ATG | GCG | ACC | TGG | ATT | CTG | GAA | CAG | TGT | GGT | TAC | AAA | CCG | GGC | TTT | GTA | ATC | |
| GGC | GGT | GTG | CCG | GGG | AAC | TTT | GAG | GTT | TCG | GCT | CAT | CTG | GGC | GAA | AGC | GAC | |
| TTC | TTT | GTT | ATC | GAA | GCG | GAT | GAG | TAT | GAC | TGC | GCC | TTC | TTC | GAC | AAA | CGC | |
| TCT | AAA | TTT | GTT | CAT | TAC | TGC | CCG | CGT | ACG | CTG | ATC | CTC | AAC | AAC | CTT | GAG | |
| TTC | GAT | CAC | GCC | GAT | ATC | TTT | GAC | GAC | CTG | AAA | GCG | ATC | CAG | AAA | CAG | TTC | |
| CAC | CAT | CTG | GTG | CGT | ATC | GTT | CCG | GGG | CAG | GGC | CGT | ATT | ATC | TGG | CCG | GAA | |
| AAT | GAC | ATC | AAC | CTG | AAA | CAG | ACC | ATG | GCG | ATG | GGC | TGC | TGG | AGC | GAG | CAG | |
| GAG | CTG | GTG | GGT | GAG | CAG | GGT | CAC | TGG | CAG | GCG | AAA | AAG | CTG | ACC | ACC | GAT | |
| GCT | TCC | GAA | TGG | GAA | GTT | TTG | CTG | GAT | GGC | GAA | AAA | GTG | GGC | GAA | GTG | AAA | |
| TGG | TCG | CTG | GTA | GGC | GAA | CAT | AAT | ATG | CAC | AAT | GGC | CTG | ATG | GCG | ATT | GCA | |
| GCG | GCT | CGC | CAT | GTT | GGT | GTA | GCG | CCG | GCA | GAT | GCC | GCT | AAC | GCG | CTG | GGT | |
| TCG | TTT | ATT | AAT | GCT | CGT | CGC | CGT | CTG | GAG | TTG | CGT | GGT | GAA | GCG | AAT | GGC | |
| GTC | ACG | GTA | TAT | GAC | GAT | TTT | GCC | CAT | CAC | CCG | ACG | GCG | ATT | CTG | GCA | ACG | |
| CTG | GCG | GCG | CTG | CGT | GGC | AAA | GTT | GGT | GGT | ACG | GCG | CGC | ATT | ATT | GCT | GTG | |
| CTG | GAG | CCG | CGC | TCG | AAT | ACC | ATG | AAA | ATG | GGG | ATC | TGC | AAA | GAC | GAT | CTG | |
| GCA | CCT | TCA | TTA | GGT | CGT | GCC | GAT | GAA | GTC | TTC | CTG | CTG | CAA | CCG | GCG | CAT | |
| ATT | CCG | TGG | CAG | GTG | GCA | GAA | GTG | GCA | GAA | GCC | TGC | GTT | CAG | CCT | GCA | CAC | |
| TGG | AGT | GGC | GAT | GTG | GAT | ACG | CTG | GCA | GAT | ATG | GTG | GTG | AAA | ACC | GCT | CAG | |
| CCT | GGC | GAC | CAT | ATT | CTG | GTG | ATG | AGC | AAC | GGC | GGT | TTT | GGT | GGG | ATC | CAT | |
| CAG | AAA | CTG | CTG | GAT | GGG | CTG | GCG | AAG | AAG | GCG | GAA | GCC | GCG | CAG | TAA |
|
| TTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA |
| TTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTA |
| TCCGGCAAACCATACTCACATCAACAACGAAAA
|
| TTA | CCC | TTC | GTT | CTC | CGC | TAA | CTC | GCG | CAG | ATA | CTG | GAA | AAT | CTG | GCG | TGC | |
| GGA | TTT | CGG | CGG | CTT | ATT | CCC | TTC | TTT | CTC | TTT | CTT | CGC | GTT | GCG | GAT | CAG | |
| AGT | ACG | CAG | TTG | CTG | ACG | ATC | GGC | ATC | GGG | CCA | CAG | ATT | TAA | TAC | CTC | AGC | |
| GAT | GGC | GTC | ATC | ACC | TTG | ATC | GAT | CAG | ACG | ATC | GCG | CAG | GTT | TTC | CAG | TTT | |
| ATG | GAA | CAG | CAC | CAC | CTG | CTG | GTT | GTG | ACG | GTT | TTT | CAG | CTT | ATC | CAG | CGC | |
| CTG | ACG | AAT | AGG | CTC | TAC | GTC | GCG | CTG | GCG | CAG | CAT | CTT | ACC | GAT | GAG | CTG | |
| CAA | CTG | GCG | GCG | GCG | ACC | TTC | CAT | CTT | AAT | ACG | CTG | GGC | GAG | CTC | AAT | AGC | |
| CGC | GCG | CAG | ATC | CGC | ATC | TAA | CGG | GAT | CTT | ATC | CAG | CGC | GTT | TTT | CCC | CAG | |
| ATC | AAC | AAT | TTC | CGC | GCC | AAG | GCG | TTT | TAG | CTC | CTC | GGC | ATC | ACG | TTT | AAT | |
| TTC | ACT | TTT | ACT | GAC | CCA | GAT | AAT | TTC | ATC | GTC | TTC | GTC | TTC | GAT | GTC | ATC | |
| ACC | GGG | AAC | GTC | GTC | GAG | CCA | GTC | TTC | GGG | CTG | CTT | AGT | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.