mmuM - afuC sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | TCG | CAG | AAT | AAT | CCG | TTA | CGC | GCT | CTT | CTT | GAT | AAA | CAG | GAT | ATC | CTG | |
| CTG | CTG | GAT | GGC | GCG | ATG | GCG | ACG | GAG | CTG | GAA | GCG | CGA | GGG | TGT | AAC | TTA | |
| GCC | GAC | AGC | CTG | TGG | TCA | GCC | AAA | GTG | CTG | GTA | GAA | AAC | CCG | GAG | CTT | ATC | |
| CGC | GAA | GTG | CAT | CTT | GAT | TAC | TAC | CGG | GCG | GGG | GCG | CAA | TGC | GCG | ATC | ACT | |
| GCC | AGC | TAT | CAG | GCG | ACG | CCG | GCG | GGC | TTC | GCC | GCG | CGA | GGT | CTG | GAT | GAA | |
| GCG | CAG | TCG | AAA | GCG | CTG | ATT | GGC | AAA | AGC | GTG | GAG | CTG | GCG | CGT | AAA | GCC | |
| CGT | GAA | GCG | TAT | CTG | GCA | GAG | AAC | CCG | CAG | GCG | GGA | ACG | CTT | CTG | GTG | GCG | |
| GGA | TCC | GTC | GGG | CCT | TAC | GGC | GCG | TAT | CTG | GCG | GAT | GGC | TCT | GAA | TAC | CGT | |
| GGC | GAT | TAT | CAT | TGT | AGC | GTT | GAG | GCA | TTT | CAG | GCG | TTT | CAT | CGC | CCG | CGC | |
| GTG | GAA | GCC | TTG | CTG | GAT | GCC | GGG | GCC | GAT | CTG | CTG | GCC | TGC | GAA | ACC | CTG | |
| CCG | AAT | TTT | TCC | GAG | ATT | GAG | GCG | TTG | GCC | GAG | CTG | TTG | ACC | GCA | TAT | CCG | |
| CGT | GCG | CGG | GCG | TGG | TTC | TCA | TTT | ACC | CTG | CGC | GAC | AGC | GAA | CAC | CTG | AGC | |
| GAC | GGT | ACG | CCG | CTG | CGT | GAC | GTG | GTT | GCG | TTG | CTG | GCG | GGT | TAT | CCG | CAG | |
| GTG | GTG | GCG | CTA | GGC | ATT | AAC | TGT | ATT | GCG | CTG | GAA | AAC | ACC | ACC | GCT | GCG | |
| TTG | CAG | CAT | TTA | CAC | GGT | TTA | ACG | GTG | CTG | CCG | CTG | GTG | GTG | TAT | CCG | AAC | |
| TCG | GGC | GAG | CAT | TAC | GAT | GCC | GTG | AGC | AAA | ACC | TGG | CAT | CAT | CAC | GGT | GAA | |
| CAT | TGC | GCG | CAG | CTG | GCG | GAT | TAT | CTG | CCG | CAG | TGG | CAG | GCC | GCT | GGC | GCA | |
| CGG | TTG | ATT | GGC | GGG | TGC | TGT | CGC | ACC | ACG | CCT | GCG | GAT | ATC | GCC | GCG | TTA | |
| AAA | GCG | CGA | AGC | TGA |
|
| GGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGC |
| CGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACG
|
| TTA | TGC | CGC | ATC | CGC | CAG | AAC | AAA | CAT | GCC | GTA | CGG | ATG | GAT | TTC | AAG | ATA | |
| ATA | CTG | CTC | GCC | GAC | GTC | CGG | TTG | CAG | ACG | CGT | AGC | GTT | GAC | CTG | CAA | TAA | |
| TAT | CTC | CTG | CCC | GTG | CCA | TTC | CAC | CGT | CAC | TTC | ATA | CTG | CGG | CCC | CAT | ATA | |
| GGC | GAC | ATG | GCG | GAT | CAC | GCA | GCG | CTG | GCT | CTC | TTC | GCC | GCG | ATC | GCT | GAG | |
| CGT | GAT | CGC | TTC | CGG | GCG | CAC | ACC | GAC | CAT | CCC | TTC | ACC | CTG | TGT | ACC | AAA | |
| GTG | CAG | CGG | GCG | CGG | CAG | ATG | ATA | GCC | GTA | GAT | ATC | AAC | GTA | TCC | GTC | GCT | |
| GAA | GGT | TGC | CGG | GAA | CAG | GTT | GGC | ATC | GCC | CAT | AAA | GCT | CGC | CAT | AAA | GCG | |
| GGA | GGC | GGG | CTG | GCG | GTA | AAG | ATC | CTG | CGG | TGA | GCC | GAT | CTG | CAT | GAT | GTG | |
| TCC | CTT | GTT | CAT | CAC | CAG | CAC | AGT | ATC | AGA | AAC | CGC | AAA | GGC | TTC | GCT | CTG | |
| ATC | GTG | GGT | GAC | GTA | CAG | CGA | GGT | GAT | ATC | AAA | CTG | CTT | TTG | CAA | CTC | GCG | |
| GAT | CTT | GTC | GCG | CAT | GCT | GCG | ACG | CAG | GTT | GGC | GTC | GAG | GTT | ACT | CAA | CGG | |
| CTC | ATC | AAA | CAG | CAG | CAC | TTT | CGG | CTT | GAG | GAT | CAG | CGC | GCG | GGC | CAG | CGC | |
| CAC | GCG | CTG | CTG | CTG | CCC | GCC | GGA | GAT | CTG | ATC | GAC | AAA | GCG | GTC | TTC | GAA | |
| TCC | TTC | CAG | ATC | CAC | CAT | CGC | CAA | CGC | CTC | TTT | GAC | GCG | GGC | TTT | CAG | CTC | |
| TGC | GCG | CGG | TAC | GCC | GAG | CAT | TTT | CAG | GCC | ATA | ACC | GAC | ATT | CTC | TCC | CAG | |
| CGA | CAT | ATG | CGG | GAA | CAG | GGC | ATA | GGA | CTG | AAA | CAC | CAT | ACA | GAT | ATC | GCG | |
| CTG | CTG | AAT | AGA | GCG | ATG | GGT | GAC | GTC | TTC | GCC | ATC | AAT | GAA | AAT | TTG | CCC | |
| TTC | GCT | CGG | TTT | TTC | CAG | CCC | GGC | AAC | CAG | GCG | CAA | AAT | AGT | GGT | TTT | GCC | |
| GCA | GCC | GGA | CGG | GCC | GAG | CAG | CGT | CAC | CAT | TTG | CCC | CTG | CGG | GAT | GGT | GAG | |
| GTT | GAT | ATT | GTC | GAT | TAC | CGT | ATT | ACT | GCC | AAA | TCG | TTT | AGT | GAC | GTT | GCG | |
| CAG | TTC | AAC | GAA | ATT | TTT | CTG | AGT | CAT | AGT | GCG | CTC | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.