lspA - slpA sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | AGT | CAA | TCG | ATC | TGT | TCA | ACA | GGG | CTA | CGC | TGG | CTG | TGG | CTG | GTG | GTA | |
| GTC | GTG | CTG | ATT | ATC | GAT | CTG | GGC | AGC | AAA | TAC | CTG | ATC | CTC | CAG | AAC | TTT | |
| GCT | CTG | GGG | GAT | ACG | GTC | CCG | CTG | TTC | CCG | TCG | CTT | AAT | CTG | CAT | TAT | GCG | |
| CGT | AAC | TAT | GGC | GCG | GCG | TTT | AGT | TTC | CTT | GCC | GAT | AGC | GGC | GGC | TGG | CAG | |
| CGT | TGG | TTC | TTT | GCC | GGT | ATT | GCG | ATT | GGT | ATT | AGC | GTG | ATC | CTG | GCA | GTG | |
| ATG | ATG | TAT | CGC | TCG | AAG | GCC | ACG | CAG | AAG | CTA | AAC | AAT | ATC | GCT | TAC | GCG | |
| CTG | ATT | ATT | GGC | GGC | GCG | CTG | GGC | AAC | CTG | TTC | GAC | CGC | CTG | TGG | CAC | GGC | |
| TTC | GTT | GTC | GAT | ATG | ATC | GAC | TTC | TAC | GTC | GGC | GAC | TGG | CAC | TTC | GCC | ACC | |
| TTC | AAC | CTT | GCC | GAT | ACT | GCC | ATC | TGT | GTC | GGT | GCG | GCA | CTG | ATT | GTG | CTG | |
| GAA | GGT | TTT | TTG | CCT | TCT | AGA | GCG | AAA | AAA | CAA | TAA |
|
| TAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCG |
| TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCT |
| GC
|
| ATG | TCT | GAA | TCT | GTA | CAG | AGC | AAT | AGC | GCC | GTC | CTG | GTG | CAC | TTC | ACG | CTA | |
| AAA | CTC | GAC | GAT | GGC | ACC | ACC | GCC | GAG | TCT | ACC | CGC | AAC | AAC | GGT | AAA | CCG | |
| GCG | CTG | TTC | CGC | CTG | GGT | GAT | GCT | TCT | CTT | TCT | GAA | GGG | CTG | GAG | CAA | CAC | |
| CTG | TTG | GGG | CTG | AAA | GTG | GGC | GAT | AAA | ACC | ACC | TTC | TCG | TTG | GAG | CCA | GAT | |
| GCG | GCG | TTT | GGC | GTG | CCG | TCA | CCG | GAC | CTG | ATT | CAG | TAC | TTC | TCC | CGC | CGT | |
| GAA | TTT | ATG | GAT | GCA | GGC | GAG | CCA | GAA | ATT | GGC | GCA | ATC | ATG | CTT | TTT | ACC | |
| GCA | ATG | GAT | GGC | AGT | GAG | ATG | CCT | GGC | GTG | ATC | CGC | GAA | ATT | AAC | GGC | GAC | |
| TCC | ATT | ACC | GTT | GAT | TTC | AAC | CAT | CCG | CTG | GCC | GGG | CAG | ACC | GTT | CAT | TTT | |
| GAT | ATT | GAA | GTG | CTG | GAA | ATC | GAT | CCG | GCA | CTG | GAG | GCG | TAA |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.