trs5_3 - lnt sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

TTA GTG AGA TCT CTC CCA CTG ACG TAT CAT TTG GTC CGC CCG AAA CAG GTT

GGC CAG CGT GAA TAA CAT CGC CAG TTG GTT ATC GTT TTT CAG CAA CCC CTT

GTA TCT GGC TTT CAC GAA GCC GAA CTG TCG CTT GAT GAT GCG AAA TGG GTG

CTC CAC CCT GGC CCG GAT GCT GGC TTT CAT GTA TTC GAT GTT GAT GGC CGT

TTT GTT CTT GCG TGG ATG CTG TTT CAA GGT TCT TAC CTT GCC GGG GCG CTC

GGC GAT CAG CCA GTC CAC ATC CAC CTC GGC CAG CTC CTC GCG CTG TGG CGC

CCC TTG GTA GCC GGC ATC GGC TGA GAC AAA TTG CTC CTC TCC ATG CAG CAG

ATT ACC CAG CTG ATT GAG GTC ATG CTC GTT GGC CGC GGT GGT GAC CAG GCT

GTG GGT CAG GCC ACT CTT GGC ATC GAC ACC AAT GTG GGC CTT CAT GCC AAA

GTG CCA CTG ATT GCC TTT CTT GGT CTG ATG CAT CTC CGG ATC GCG TTG CTG

CTC TTT GTT CTT GGT CGA GCT GGG TGC CTC AAT GAT GGT GGC ATC GAC CAA

GGT GCC TTG AGT CAT CAT GAC GCC TGC TTC GGC CAG CCA GCG ATT GAT GGT

CTT GAA CAA TTG GCG GGC CAG TTG ATG CTG CTC CAG CAG GTG GCG GAA ATT

CAT GAT GGT GGT GCG GTC CGG CAA GGC GCT ATC CAG GGA TAA CCG GGC AAA

CAG ACG CAT GGA GGC GAT TTC GTA CAG AGC ATC TTC CAT CGC GCC ATC GCT

CAG GTT GTA CCA ATG CTG CAT GCA GTG AAT GCG TAG CAT GGT TTC CAG CGG

ATA AGG TCG CCG GCC ATT ACC AGC CTT GGG GTA AAA CGG CTC GAT GAC TTC

CAC CAT GTT TTG CCA TGG CAG AAT CTG CTC CAT GCG GGA CAA GAA AAT CTC

TTT TCT GGT CTG ACG GCG CTT ACT GCT GAA TTC ACT GTC GGC GAA GGT AAG

TTG ATG ACT CAT GAT GAA CCC TGT TCT ATG GCT CCA GAT GAC AAA CAT

GATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGTAACATTTAGTTTGGCTAAATGTA

AAGATATTGCTGTTTTATTGTTTGTTTTTGCGAGATGCGCCGCACCATTCCGAAGCAAAAT

TCTTAAAATGCACTCTTTTAGTGCTACCGCTGGATTACTGTGGTGCAACTAGGTTGTACTG

ATGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAG

AATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGAT

GTATTCCGGCACGATAAGAAGGGA

TTA TTT ACG TCG CTG ACG CAG ACT CAT CAA CAC AGC AGC AAA ACC AAA CAA

TGC CGT CAG CAC CCA CAG CGG CCA GTT GCC GGT ACG TGC GTA TGG TGT GAG

TCC GGT GGT CGG CGT CAC GTT AGT GGT TAA CAC CTC GCG GGT GAA CTG CGG

GAT CAT CGC CTG AAT CTC ACC CTG CGG GCC AAT CAC CGC CGT AAT GCC GTT

GTT GGT GCT GCG CAA CAG TGG GCG CGC CAG CTC CAG CGC ACG CAT TCG CGC

CAT CTG GAA GTG TTG CCA TGG ACC AAT AGA TTT ACC AAA CCA CGC ATC GTT

GGA GAT AGT CAG CAG ATA GTC GGT ATC CGG GCG GAA GTT ATC GCG CAC TTG

CTC GCC GAG AAT GAT CTC GTA GCA AAT AGC CGC AGT AAG CTC AAT ACC ATT

TGC CGA CAG CGG CGG CTG GAT ATA TGG CCC ACG GCT GAA CGA CGA CAT CGG

CAG ATC AAA GAA CGG TGC TAA CGG ACG CAG AAT CGA CTC CAG CGG GAC AAA

CTC GCC AAA CGG CAC CAG ATG GTT TTT GTT ATA GCG ATC GGC TGA TTC GTA

GCT GTA CGG CGC ACC TTT ACC CAG CGT GAT GAT GGT GTT GTA GGT ATC GTA

GCG GTT CTG CTT ATT GAG ACG CGC GTC GAC AAT CCC GGT TAC CAG CGA GCT

ACC TTT ATC ACG CAA CTC ACC GTC CAG TGC TTT GAG GAA CGG TTG CTG ATT

AAT TTC CAG ATC GGT TAT CGC CGA CTC CGG CCA GAT AAT CAA CGA TGA TTT

GCC CAT CAG CGG TGC CGT TGC GTT GTA GTA AAT CTT CAG CGT ATT AAG AAG

CTG GCC TTC GTC CCA TTT CAG CGA TTG CGG AAT ATC GCC CTG AAC CAT CGA

AAC CTG AAT GGT TTT CTC CGG TTG TGG GGT AAA CCA CTG GAT GTA ACG CAG

CGG GAA GGG AAG GGC AAA CAG CAC GAC GGC CAC CAC CAG CGG ACG CCA GTT

GCG TTT GAC CAA CGC CAG TGC CAG CAG GCC ACT AAC CAT CAT CAG CAG GAA

GTT AAT GGC TTC CAC GCC CAT TAT CGG TGC CAG CCC TTT TAA CGG GCC ATC

AAT CTG GCT ATA GCC GAA CTG TAA CCA CGG GAA GCC GGT CAG TAC CCA ACC

GCG CAG AAA CTC GGT CAC TTG CCA GAG GGC AGG GGC GGC AAT CGC TAC GCG

CAG CCA GGT GGT TTT CGG CCA CAG ACG CGA CAG CAC GCC AGC AAA CAG TCC

GGT ATA CAG CGA CAA ATA CGC CGC CAG CAG CAC CAC CAG GAA GAT GTT AAC

CGG GCC AGG CAT TCC GCC AAA GGT CGC GAT GCT GAC ATA GAC CCA GTT AAT

ACC GCT GCC AAA GAG GCC AAA TCC CCA GCA AAA GCC AAT AGC GGC AGA CTG

GAG TGG ACG GCG GTT AAA GGT CAA CGC CTG AAG CCC CAT CAG CGA AAT AAT

CGC CGC AGG CCA GAC GTC GTA AGG AGA GAA GGC CAG CGT TCC GCA GGC ACC

GAA TAA TAA CGC CAG CAG CAG GCG AAT GCG CTG GCG TTC AAT TAA TGA GGC

AAA AGC CAT

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

trs5_3 - lnt sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.