S. typhimurium livJ - livK sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG AAG GGT AAA ACG TTA TTG GCA GGA TGT ATC GCC CTG TCA TTA AGC CAT

ATG GCA TTC GCC GAC GAC ATT AAA GTC GCG GTT GTC GGC GCG ATG TCC GGT

CCG GTG GCG CAG TAT GGC GAC CAG GAA TTT ACC GGT GCG GAG CAG GCA ATT

GCC GAT ATC AAT GCG AAA GGC GGT ATT AAA GGC GAT AAG CTC GTC GCG GTG

AAA TAT GAC GAC GCC TGC GAC CCG AAA CAG GCG GTA GCT GTC GCT AAC AAA

GTG GTG AAC GAC GGC ATC AAG TAT GTT ATC GGT CAC TTA TGT TCC TCT TCC

ACA CAG CCA GCG TCT GAT ATC TAC GAA GAC GAA GGC ATC CTG ATG ATA ACC

CCG GCG GCG ACC GCG CCG GAG CTG ACC GCG CGC GGC TAT AAG TTG GTT TTG

CGC ACC ACC GGT CTG GAC TCT GAC CAG GGG CCA ACG GCG GCA AAG TAT ATT

CTG GAG AAG GTA AAA CCG CAG CGC ATC GCG ATT ATC CAC GAT AAG CAG CAG

TAC GGC GAA GGG CTG GCG CGC GCG GTG CAG GAC GGT CTG AAG AAA GGC GGC

GTT AAC GTC GTA TTC TTT GAC GGC ATC ACC GCT GGC GAA AAA GAT TTC TCC

ACT CTG GTT GCG CGC CTG AAG AAA GAG AAT ATC GAC TTT GTC TAC TAC GGC

GGT TAT CAC CCG GAA ATG GGG CAG ATT TTG CGC CAG TCC CGC GCC GCA GGG

CTG AAA ACC CAG TTT ATG GGG CCG GAA GGG GTG GCG AAC GTG TCG CTG TCT

AAC ATC GCC GGA GAG TCA GCG GAA GGC TTA CTG GTC ACC AAA CCG AAG AAC

TAC GAC CAG GTC CCG GCG AAC AAA CCG ATT GTG GAT GCC ATC AAA GCC AAG

AAA CAA GAT CCT AGC GGC GCA TTC GTG TGG ACC ACC TAC GCC GCG CTG CAA

TCG TTG CAG GCG GGC CTG AAC CAC TCC GAC GAT CCG GCG GAA ATC GCC AAA

TAC CTG AAA GGC GCC ACG GTC GAC ACC GTA ATG GGA CCG CTG TCG TGG GAT

GAG AAA GGC GAT CTG AAA GGA TTT GAG TTC GGC GTG TTT GAC TGG CAT GCG

AAT GGT ACG GCG ACA GAC GCT AAG TGA

TTTTCTGGCGCCTTTCGCGCTGCAGGTGCGTTGGCTACGTTATTCAACCCCGGTCACTTAC

TTATGTAAGCTCCCGGGGATTTCATAACTTGCCGCCTGCCTGCAACGCGAAATTCTTGGAA

AATTGCGAGGTGGTTTTTATCTTTTCTCCCGGCATGTAGGCCGGATAAGCGTCAGCGCCAT

CCGGCTTTCTTTTAGCGCTTCTCCCAGCCGTCATGCTGGGCGGTAAAACCTAACGCCTGCA

TAAACGCGGCCATCACGCTGCGGTCTTCAACACCGACATCCGCCATCCACCACGACGAGAC

GTTGGGATTATCGCGGATGACTTCTTCTACCAGGTATTGCCCGACGCCGCGGCGACGGCTG

ATTTCACGCACGCGTAAGGAATCCAGCGCGCCCTGCGTTCCGCTCAGCGTCACTCTTACGG

CGCCCAACAAACGCTCATTAAACCGCGCGGCATAAATCCGGTGCGTTTCATCTACGCTTAA

TGAGGAGGCGGAATATTCCGGCCAGATTTTGCCCAGATCGATCTGATCCTGAGCGCTAAAG

TGTTCTAAACGAAGAATGGTCATCTTCAGCGACGGCTTGTCCCGATTTCAAAAGATGCGAT

CAGTGTACCGAAACAGGCAGGCCAGATGCTTTCTCTTTTTTGTGTCATTTACCAGGTTATT

AATTTTTTAACAACGATAATTACAGTTTGAAGCATTAGAGAATGGAAAACAGGCAGCATAA

TTCCCTGAATGCTAGTGAATTATTCCGCTTAATATGCCGTTATTTTATGCTGACAAGCATG

CTTTTTTTTGTTTATCTATAGCGAAAAGCAGAATATTATCTTTTCTTAATAGACTGAAAAA

TAGAGATTTTAATCTTATTATGCTTTAAATCGTGCGCTAACTCATTAATGAGTCAGTAAAA

AGCGCACCATTTATAAAAAGTACAGTCTGCTTTTTAACCAGCAAAAAACAAAACATATAAC

ATCACGAATGGGGATACAGGCAC

ATG AAA CGG AAA GCG AAA ACA ATA ATC GCA GGG ATT GTT GCA TTA GCA GTC

TCG CAG GGG GCA ATG GCA GAT GAT ATT AAA GTC GCC ATA GTC GGG GCG ATG

TCC GGC CCG GTA GCG CAA TGG GGC GAT ATG GAA TTT AAC GGC GCG CGC CAG

GCC ATT AAA GAC ATC AAC GCG AAA GGC GGG ATT AAA GGC GAT AAG CTG GTC

GGC GTA GAG TAC GAT GAT GCC TGC GAT CCA AAA CAG GCG GTG GCG GTG GCC

AAC AAA ATC GTT AAC GAC GGT ATT CAG TAC GTT ATT GGT CAC TTG TGT TCT

TCT TCT ACT CAG CCA GCA TCC GAT ATC TAT GAA GAT GAA GGT ATT CTG ATG

ATC TCC CCG GGG GCG ACT AAC CCG GAG CTG ACC CAG CGC GGC TAT CAG TAC

ATT ATG CGT ACC GCC GGC CTG GAC TCC TCC CAG GGG CCA ACA GCC GCG AAA

TAC ATC CTG GAA ACG GTG AAA CCG CAG CGC ATC GCT ATC ATT CAC GAT AAA

CAG CAA TAC GGC GAA GGA CTG GCG CGC TCC GTG CAG GAT GGC CTG AAG CAG

GGC AAT GCC AAT ATT GTC TTT TTT GAT GGT ATT ACC GCT GGC GAA AAA GAT

TTC TCC GCC CTG ATT GCC CGC TTG CAA AAA GAG AAT ATC GAC TTT GTG TAT

TAC GGC GGC TAC TAC CCG GAA ATG GGG CAG ATC GTA CGC CAG GCG CGG GCT

AAT GGC CTG AAA ACG CAA TTT ATG GGG CCG GAA GGC GTA GGT AAC GCG TCG

CTG TCC AAT ATT GCG GGC GGT GCG GCG GAA GGC ATG TTG GTG ACG ATG CCA

AAA CGT TAT GAC CAG GAC CCG GCG AAT AAA GCG ATT GTC GAA GCG CTG AAA

GCC GAC AAG AAA GAT CCC AGC GGT CCG TAC GTC TGG ATC ACC TAC GCC GCC

GTC CAG TCA CTG GCG ACC GCA ATG ACG CGT AGC GCC AGC CAT CGT CCG CTG

GAT CTG GTG AAA GAT CTT AAA GCT AAC GGG GCT GAT ACC GTT ATT GGG CCG

CTG AAA TGG GAT GAA AAA GGC GAT CTT AAG GGA TTT GAA TTT GGC GTC TTC

CAG TGG CAC GCC GAC GGC TCG TCA ACC GTC GCG AAG TAA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

S. typhimurium livJ - livK sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.