kdgK - yhjJ sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

GTG TTT AAA AGT GAT GCT GCC CGG ACT CGA CAA AGA TTA TCG GCG CGT AAG

GGC AGA ACT TTA CCG CCT GGC CGG GGT AAA TTT CCT CAC TCC ACA ACG GAA

TCT TTC AGG AAT ACG TTC TGG CTC AAA AAA ATA ATG GAA CAC TGT TTT AAT

ATG GTT GAC CAG CAA ACC ACC ACA GCG CAA ACT AAC GCT AAT TTT TTA CAG

ATC AGG TTC ACG ACT ATG TCC AAA AAG ATT GCC GTG ATT GGC GAA TGC ATG

ATT GAG CTT TCC GAG AAA GGC GCG GAC GTT AAG CGC GGT TTC GGC GGC GAT

ACC CTG AAC ACT TCC GTC TAT ATC GCC CGT CAG GTC GAT CCT GCG GCA TTA

ACC GTT CAT TAC GTA ACG GCG CTG GGA ACG GAC AGT TTT AGC CAG CAG ATG

CTG GAC GCC TGG CAC GGC GAG AAC GTT GAT ACT TCC CTG ACC CAA CGG ATG

GAA AAC CGT CTG CCG GGC CTT TAC TAC ATT GAA ACC GAC AGC ACC GGC GAG

CGT ACG TTC TAC TAC TGG CGG AAC GAA GCC GCC GCC AAA TTC TGG CTG GAG

AGT GAG CAG TCT GCG GCG ATT TGC GAA GAG CTG GCG AAT TTC GAT TAT CTC

TAC CTG AGC GGG ATT AGC CTG GCG ATC TTA AGC CCG ACC AGC CGC GAA AAG

CTG CTT TCC CTG CTG CGC GAA TGC CGC GCC AAC GGC GGA AAA GTG ATT TTC

GAC AAT AAC TAT CGT CCG CGC CTG TGG GCC AGC AAA GAA GAG ACA CAG CAG

GTG TAC CAA CAA ATG CTG GAA TGC ACG GAT ATC GCC TTC CTG ACG CTG GAC

GAC GAA GAC GCG CTG TGG GGT CAA CAG CCG GTG GAA GAC GTC ATT GCG CGC

ACC CAT AAC GCG GGC GTG AAA GAA GTG GTG GTG AAA CGC GGG GCG GAT TCT

TGC CTG GTG TCC ATT GCT GGC GAA GGG TTA GTG GAT GTT CCG GCG GTG AAA

CTG CCG AAA GAA AAA GTG ATC GAT ACC ACC GCA GCT GGC GAC TCT TTC AGT

GCC GGT TAT CTG GCG GTA CGT CTG ACA GGC GGC AGC GCG GAA GAC GCG GCG

AAA CGT GGG CAC CTG ACC GCA AGT ACC GTT ATT CAG TAT CGC GGC GCG ATT

ATC CCG CGT GAG GCG ATG CCA GCG TAA

ACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATA

CCTGATGGTTGTGCTAACTCATCACCATCAGGCA

TTA CTG TGC AGG TGG AAT ATC CGT CAC TTC AGG ATG TAC GTC ATC CGT GGC

GAC AGA GGT GGT CGC AGC GGC GGT AGA TGG GGC CAT GAT TTG ATC CCA GAC

CGC CTG CAA CGC TTT CAT GTT AAA TTC CGG CTC GCC TTT CGG CTG CAG CAG

TAT TAA CGC CAT ATC ATT CGA CAA CTG TTG ACG CAG ATC CTG ATT TAA CAT

CTC TAC CGT CAG GCT ATT AAG GAA ATC CTG CCG CAG TTT CTG ATA TTG CTC

CGG CGC GAT ATC GAC AAC CTG ATT TTG CAA CGA ACG CAT CCG CTG ACC CAT

CAG AAT ATC GGT ATC AGC TCG TGC ATA GGC GGC AAA CAG TTT CTG CAG CTC

CAG TTT CTT TTG CGC CAC TAA CGC ATT GAA CTC TTC TTC CGG CAG ACC TTT

ATC GCG AAC CTT CGC CAG TTC ACG CGC CAC CAG ATT AAG GTT GCT GTT CAG

CTT GTC GTT TGG TGA TTC GAT GTT GAT GGC ACA CTG CGC ACG CAG ATA CAG

CAC ACG GCA GTC AAA TCC AAG ACC GAT GTC TTT GCT GTT ACT GGC ACT TAA

CGC TTG CTG AAC ATG CCA GAA CAG CGC CTC GCG GGC CAG GTC CGC ACG CCA

GTA GCG CAG CAG TGC GGC TGA TTC ACG AAT CGG CTG CCA CGG CGT ATC CCA

CAT GAT AGA TAA CCG GTC CTG ACG CAC CGC GTC AGT CAT AAT ACT CAC CGC

TTC CGC ACG CAG CGG AGA AAG CGT CGG CAC CGG AGC TGG CGT TTC ACG TTT

GCC TTT CAG TTC GCC AAA CGT TTT GTT TAT TTG GTC GAC AAC CGA GCG CGC

ATC CAC GTT TCC CAC CAC CAG TAG CGT CAT TGC ATC CGG GGT GTA CCA TTT

CTG ATA GAA ATC TTT AAT TTT TTC CGC TTC AAC GGG TTG TTT CAG CGG ATC

GGC AGG ATC GTG ACC TAA CAA GGT TGA CCC TTT CAG ACG ATA GCG CCA CCA

GCC CTC TTT AGT ATC GGC AGG CCA GGT TGC CAC CAT GTC CTG ACT TTG CAG

CGC GTG GTT GAT GGT TTC TGG TGT GAT GGT CAA TTT GCC AGT GGC ATT TGC

CAG ATA AGA GAG CGC TTC TTT CAG CAA ATC GTT ACG GTT ATT GGG CAA ACT

CAG ATT AAA CAG CGT GGT GTC ATA AGA GAC AAT TAC CGG CGG CAT CGG GCG

TTT AGG GTC GAT CCC CTG CTG CCA CAA TGA ACG CGC CTG TGC TGC GTC AAG

GCC ACC GCT TTG CGT TAG CGC AAT ACG AGG GAT GGC GTG ACT GTA ACC GCT

CTG TTG TGT ACT TTC GGC GAG CGA ACC GGT ATT AAC CAG CAG GCG AAT TTC

AAC ACG ATC GCT GGG ACG CTG GGG GGT GGT CAG CAC TTG CCA CTG TAA ACC

GTT GGA AAG CGT CCC CTG TTG CCA TGC TGG ATC AGG CTG GAG CGC ATC TGC

CTG CAC ATA GCC AGC AGT GGC CAT CAT CAG CAA ACC GCC CGC TAA AAG TCG

AAT TTT TGT GCC CTG CAT

Back to the table of contents

Please send questions and comments to Sophie.Bachellier@pasteur.fr.

kdgK - yhjJ sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.