Y. pseudotuberculosis orf - invA sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

TCATCAAGGCAACCATCAGGATTAATGCGGATATTGCGGAGTAACACTTCAGACTGAAAGTA

GAAATAAAAACCGCAGCAGACAACTGACAACATCAAATGAAGGGGGCTTATTCTAATTGATA

TTATTTATATGATAATAGTTCATTTTGTATTTTTGTTTTTTTTGATATTCTCACCTGCTTAG

TTACAATAAATCAATTCTATCGCTGTATGGTATAGACTGTTTTATTATATATTTTGAATATT

TTTAATCTGCCCAGTCTGGTTTTTTAAAAAAGTGCTATCCTCTTAATGTCTTTACTAAATTA

GAAAACAAGTTTCACTTTCAACTATTGCATCTTTAATTAATGGTCAAGGTGATTTCAAATGC

TCGTTTGTGGCCAGTTATACCTCAAATAACTCAAGTTGTTGAGCACAGCCAACGCACATGCA

GTTTGACGTATGACAGGTATGCTTTATTTCATTTAAATT

ATG ATG GTT TTC CAG CCA ATC AGT GAG TTT CTC TTG ATA AGG AAT GCG GGA

ATG TCT ATG TAT TTT AAT AAA ATA ATT TCA TTT AAT ATT ATT TCA CGA ATA

GTT ATT TGT ATC TTT TTG ATA TGT GGA ATG TTC ATG GCT GGG GCT TCA GAA

AAA TAT GAT GCT AAC GCA CCG CAA CAG GTC CAG CCT TAT TCT GTC TCT TCA

TCT GCA TTT GAA AAT CTC CAT CCT AAT AAT GAA ATG GAG AGT TCA ATC AAT

CCC TTT TCC GCA TCG GAT ACA GAA AGA AAT GCT GCA ATA ATA GAT CGC GCC

AAT AAG GAG CAG GAG ACT GAA GCG GTG AAT AAG ATG ATA AGC ACC GGG GCC

AGG TTA GCT GCA TCA GGC AGG GCA TCT GAT GTT GCT CAC TCA ATG GTG GGC

GAT GCG GTT AAT CAA GAA ATC AAA CAG TGG TTA AAT CGA TTC GGT ACG GCT

CAA GTT AAT CTG AAT TTT GAC AAA AAT TTT TCG CTA AAA GAA AGC TCT CTT

GAT TGG CTG GCT CCT TGG TAT GAC TCT GCT TCA TTC CTC TTT TTT AGT CAG

TTA GGT ATT CGC AAT AAA GAC AGC CGC AAC ACA CTT AAC CTT GGC GTC GGG

ATA CGT ACA TTG GAG AAC GGT TGG CTG TAC GGA CTT AAT ACT TTT TAT GAT

AAT GAT TTG ACC GGC CAC AAC CAC CGT ATC GGT CTT GGT GCC GAG GCC TGG

ACC GAT TAT TTA CAG TTG GCT GCC AAT GGG TAT TTT CGC CTC AAT GGA TGG

CAC TCG TCG CGT GAT TTC TCC GAC TAT AAA GAG CGC CCA GCC ACT GGG GGG

GAT TTG CGC GCG AAT GCT TAT TTA CCT GCA CTC CCA CAA CTG GGG GGG AAG

TTG ATG TAT GAG CAA TAC ACC GGT GAG CGT GTT GCT TTA TTT GGT AAA GAT

AAT CTG CAA CGC AAC CCT TAT GCC GTG ACT GCC GGG ATC AAT TAC ACC CCC

GTG CCT CTA CTC ACT GTC GGG GTA GAT CAG CGT ATG GGG AAA AGC AGT AAG

CAT GAA ACA CAG TGG AAC CTC CAA ATG AAC TAT CGC CTG GGC GAG AGT TTT

CAG TCG CAA CTT AGC CCT TCA GCG GTG GCA GGA ACA CGT CTA CTG GCG GAG

AGC CGC TAT AAC CTT GTC GAT CGT AAC AAT AAT ATC GTG TTG GAG TAT CAG

AAA CAG CAG GTG GTT AAA CTG ACA TTA TCG CCA GCA ACT ATC TCC GGC CTG

CCG GGT CAG GTT TAT CAG GTG AAC GCA CAA GTA CAA GGG GCA TCT GCT GTA

AGG GAA ATT GTC TGG AGT GAT GCC GAA CTG ATT GCC GCT GGC GGC ACA TTA

ACA CCA CTG AGT ACC ACA CAA TTC AAC TTG GTT TTA CCG CCT TAT AAA CGC

ACA GCA CAA GTG AGT CGG GTA ACG GAC GAC CTG ACA GCC AAC TTT TAT TCG

CTT AGT GCG CTC GCG GTT GAT CAC CAA GGA AAC CGA TCT AAC TCA TTC ACA

TTG AGC GTC ACC GTT CAG CAG CCT CAG TTG ACA TTA ACG GCG GCC GTC ATT

GGT GAT GGC GCA CCG GCT AAT GGG AAA ACT GCA ATC ACC GTT GAG TTC ACC

GTT GCT GAT TTT GAG GGG AAA CCC TTA GCC GGG CAG GAG GTG GTG ATA ACC

ACC AAT AAT GGT GCG CTA CCG AAT AAA ATC ACG GAA AAG ACA GAT GCA AAT

GGC GTC GCG CGC ATT GCA TTA ACC AAT ACG ACA GAT GGC GTG ACG GTA GTC

ACA GCA GAA GTG GAG GGG CAA CGG CAA AGT GTT GAT ACC CAC TTT GTT AAG

GGT ACT ATC GCG GCG GAT AAA TCC ACT CTG GCT GCG GTA CCG ACA TCT ATC

ATC GCT GAT GGT CTA ATG GCT TCA ACC ATC ACG TTG GAG TTG AAG GAT ACC

TAT GGG GAC CCG CAG GCT GGC GCG AAT GTG GCT TTT GAC ACA ACC TTA GGC

AAT ATG GGC GTT ATC ACG GAT CAC AAT GAC GGC ACT TAT AGC GCA CCA TTG

ACC AGT ACC ACG TTG GGG GTA GCA ACA GTA ACG GTG AAA GTG GAT GGG GCT

GCG TTC AGT GTG CCG AGT GTG ACG GTT AAT TTC ACG GCA GAT CCT ATT CCA

GAT GCT GGC CGC TCC AGT TTC ACC GTC TCC ACA CCG GAT ATC TTG GCT GAT

GGC ACG ATG AGT TCC ACA TTA TCC TTT GTC CCT GTC GAT AAG AAT GGC CAT

TTT ATC AGT GGG ATG CAG GGC TTG AGT TTT ACT CAA AAC GGT GTG CCG GTG

AGT ATT AGC CCC ATT ACC GAG CAG CCA GAT AGC TAT ACC GCG ACG GTG GTT

GGG AAT AGT GTC GGT GAT GTC ACA ATC ACG CCG CAG GTT GAT ACC CTG ATA

CTG AGT ACA TTG CAG AAA AAA ATA TCC CTA TTC CCG GTA CCT ACG CTG ACC

GGT ATT CTG GTT AAC GGG CAA AAT TTC GCT ACG GAT AAA GGG TTC CCG AAA

ACG ATC TTT AAA AAC GCC ACA TTC CAG TTA CAG ATG GAT AAC GAT GTT GCT

AAT AAT ACT CAG TAT GAG TGG TCG TCG TCA TTC ACA CCC AAT GTA TCG GTT

AAC GAT CAG GGT CAG GTG ACG ATT ACC TAC CAA ACC TAT AGC GAA GTG GCT

GTG ACG GCG AAA AGT AAA AAA TTC CCA AGT TAT TCG GTG AGT TAT CGG TTC

TAC CCA AAT CGG TGG ATA TAC GAT GGC GGC AGA TCG CTG GTA TCC AGT CTC

GAG GCC AGC AGA CAA TGC CAA GGT TCA GAT ATG TCT GCG GTT CTT GAA TCC

TCA CGT GCA ACC AAC GGA ACG CGT GCG CCT GAC GGG ACA TTG TGG GGC GAG

TGG GGG AGC TTG ACC GCG TAT AGT TCT GAT TGG CAA TCT GGT GAA TAT TGG

GTC AAA AAG ACC AGC ACG GAT TTT GAA ACC ATG AAT ATG GAC ACA GGC GCA

CTG CAA CCA GGG CCT GCA TAC TTG GCG TTC CCG CTC TGT GCG CTG TCA ATA

TAA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

Y. pseudotuberculosis orf - invA sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.