S. typhimurium infB - rbfA sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG ACA GAT GTA ACC CTA AAA GCG CTG GCC GCA GAG AGA CAG GTT TCC GTG

GAT CGC CTG GTA CAG CAG TTT GCT GAT GCA GGT ATC CGG AAA TCT GCT GAC

GAC TCT GTG TCC GCA CAA GAA AAA CAG ACT TTA CTG GCG CAC CTG AAC CGC

GAA GCG GTT TCT GGT CCC GAT AAA CTG ACG CTG CAG CGT AAA ACG CGC AGC

ACC CTG AAT ATT CCT GGT ACC GGT GGA AAA AGT AAA TCG GTA CAA ATC GAA

GTC CGC AAG AAG CGC ACC TTT GTG AAA CGC GAT CCG CAA GAG GCT GAA CGC

CTG GCC GCG GAA GAG CAG GCG CAG CGT GAA GCG GAA GAG CAA GCC CGT CGT

GAG GCA GAA GAA CAG GCC AAA CGC GAG GCG CAA CAA AAA GCT GAA CGC GAG

GCC GCA GAA CAA GCT AAG CGT GAA GCC GCT GAA AAA GCG AAA CGT GAA GCT

GCG GAA AAA GAC AAA GTG AGC AAT CAA CAG ACT GAC GAT ATG ACC AAA ACC

GCC CAG GCC GAA AAA GCC CGC CGT GAG AAT GAA GCT GCA GAC CTG AAG CGT

AAA GCG GAA GAA GAA GCA CGT CGC AAA CTC GAA GAA GAA GCG CGT CGT GTA

GCA GAA GAA GCT CGC CGC ATG GCG GAA GAA AAC AAA TGG ACC GCA ACG CCT

GAG CCA GTA GAA GAC ACC AGT GAC TAT CAT GTC ACC ACT TCT CAG CAC GCT

CGC CAG GCC GAA GAC GAA AAC GAT CGT GAA GTA GAA GGC GGT CGT GGT CGT

GGC CGT AAT GCA AAA GCA GCG CGT CCG GCG AAA AAA GGC AAA CAT GCC GAA

TCC AAA GCC GAT CGC GAA GAA GCG CGT GCT GCG GTT CGC GGC GGT AAA GGC

GGC AAG CGT AAA GGG TCT TCT TTA CAG CAA GGC TTC CAG AAG CCC GCT CAG

GCC GTT AAC CGC GAC GTG GTG ATC GGT GAA ACC ATC ACC GTT GGC GAA CTG

GCG AAC AAG ATG GCG GTT AAA GGC TCT CAG GTC ATC AAA GCG ATG ATG AAG

CTG GGT GCT ATG GCC ACC ATC AAC CAG GTT ATC GAC CAG GAA ACC GCA CAA

CTG GTT GCC GAA GAG ATG GGC CAC AAA GTT ATC CTG CGT CGT GAA AAC GAA

CTG GAA GAA GCG GTA ATG AGC GAC CGT GAT ACC GGC GCT GCG GCT GAA CCG

CGC GCC CCG GTT GTG ACC ATC ATG GGT CAC GTT GAC CAC GGT AAA ACC TCT

CTG CTG GAC TAC ATT CGT TCC ACG AAA GTG GCC TCT GGC GAA GCG GGC GGC

ATT ACC CAG CAC ATC GGT GCT TAC CAC GTT GAA ACT GAC AAC GGG ATG ATC

ACC TTC CTG GAC ACC CCG GGT CAC GCC GCG TTT ACC TCG ATG CGT GCT CGC

GGC GCC CAG GCA ACG GAT ATC GTG GTT CTG GTG GTA GCG GCA GAC GAT GGC

GTG ATG CCG CAG ACT ATC GAA GCT ATC CAG CAC GCG AAA GCG GCA GGT GTG

CCG GTC GTG GTT GCG GTG AAC AAA ATC GAT AAG CCG GAA GCC GAT CCG GAT

CGC GTT AAG AAC GAA CTG TCC CAG TAC GGC ATT CTG CCG GAA GAG TGG GGC

GGC GAG AGC CAG TTC GTT CAC GTG TCT GCG AAA GCG GGC ACC GGT ATC GAC

GAA CTG CTG GAC GCT ATC CTG CTG CAG GCC GAA GTT CTG GAA CTG AAA GCC

GTT CGT AAA GGT ATG GCG AGC GGT GCG GTG ATC GAA TCC TTC CTG GAT AAA

GGT CGT GGT CCG GTG GCT ACC GTT CTG GTA CGC GAA GGT ACG CTG CAT AAG

GGC GAT ATC GTG CTG TGT GGC TTC GAA TAC GGC CGC GTG CGT GCG ATG CGT

AAC GAA CTG GGT CAG GAA GTG CTG GAA GCG GGG CCG TCC ATT CCG GTG GAA

ATC CTC GGC CTG TCC GGC GTT CCG GCT GCG GGT GAC GAA GTG ACC GTC GTT

CGC GAC GAG AAG AAA GCG CGT GAA GTT GCT CTG TAT CGT CAG GGT AAA TTC

CGT GAA GTT AAA CTG GCG CGT CAG CAG AAA TCT AAA CTT GAG AAC ATG TTC

GCC AAC ATG ACC GAA GGC GAA GTT CAC GAA GTG AAC ATC GTG CTG AAG GCC

GAC GTA CAG GGT TCT GTG GAA GCG ATC TCC GAC TCT TTG CTG AAA CTG TCT

ACC GAC GAA GTG AAA GTG AAG ATC ATC GGT TCT GGC GTA GGT GGT ATC ACC

GAA ACC GAC GCG ACC CTG GCT GCG GCG TCC AAC GCC ATT CTG GTT GGC TTC

AAC GTT CGT GCC GAT GCC TCT GCG CGT AAA GTG ATC GAA TCT GAA AGC CTG

GAT CTG CGT TAC TAC TCC GTC ATC TAT AAC CTG ATC GAC GAA GTG AAA GCG

GCG ATG AGC GGT ATG CTG TCT CCG GAA CTG AAA CAG CAG ATT ATC GGT CTG

GCT GAA GTG CGC GAT GTG TTC AAA TCG CCG AAA TTC GGC GCG ATC GCG GGC

TGT ATG GTT ACC GAA GGT ACG ATT AAA CGC CAT AAC CCA ATC CGC GTA CTG

CGC GAC AAC GTG GTT ATC TAT GAA GGC GAG CTG GAA TCC CTG CGC CGC TTC

AAA GAT GAC GTT AAC GAA GTC CGT AAC GGC ATG GAA TGT GGT ATC GGC GTG

AAG AAC TAC AAC GAC GTT CGC GTT GGC GAT ATG ATT GAA GTA TTC GAA ATT

ATC GAG ATC CAA CGT ACC ATC GCT TAA

TCTTCGTCGTCTTTTGGGCCGCAACGGCGTTGGCTGCGCTCGCTCACCCCGGTCACATAGT

TATCTATGCTCCCGGGGATTTACGAGCTTGCCGCCTTGTTGCAATCCAAAATCCTTAGAAG

ATGATTAGGCGTAGGCCGGGTAAGCGAAGCGCCACCCGGCAAGAAATTTAAAAAGGGGCTT

ATGGCCCCTTTTTTGTCTTTATTCTGGAGAATTTATT

ATG GCG AAA GAA TTT GGT CGC CCT CAG CGC GTA GCG CAA GAG ATG CAA AAA

GAG AT. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...

Back to the table of contents

Please send questions and comments to Sophie.Bachellier@pasteur.fr.

S. typhimurium infB - rbfA sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.