E. coli W hpaF - hpaH sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | CCG | CAC | TTT | ATC | GTT | GAA | TGC | AGT | GAC | AAC | ATC | CGC | GAA | GAA | GCC | GAC | |
| CTG | CCG | GGG | TTG | TTC | GCC | AAA | GTG | AAT | CCG | ACG | CTG | GCA | GCC | ACG | GGT | ATT | |
| TTT | CCG | CTG | GCG | GGT | ATT | CGC | AGC | CGC | GTG | CAT | TGG | GTC | GAT | ACC | TGG | CAG | |
| ATG | GCC | GAC | GGG | CAG | CGT | GAT | TAT | GCC | TTC | GTG | CAT | ATG | ACG | TTG | AAA | ATC | |
| GGC | GCA | GGT | CGC | AGC | CTG | GAA | AGC | CGT | CAG | CAG | GCG | GGT | GAA | ATG | CTG | TTT | |
| GAA | CTG | ATT | AAA | ACG | CAC | TTC | GCC | GCC | CTG | ATG | GAG | AGC | CGC | CTG | CTG | GCG | |
| TTG | TCG | TTT | GAG | ATT | GAA | GAG | CTG | CAT | CCG | ACG | CTG | AAT | TTT | AAA | CAA | AAC | |
| AAC | GTG | CAC | GCA | TTG | TTT | AAG | TAG |
|
| CGCGCAGATTGCCCGGTGGCGCTGCGCTTACCGGGCCTACAAAACCCCAAACCGTACACCG |
| TAGGCCGGATAAGGCGCAGCCGCATCCGGCAATGCCACAGGATATCGCT |
| ATG | TTC | GAT | AAA | CAT | ACC | CAC | ACC | CTG | ATC | GCC | CAG | CGT | CTG | GAT | CAG | GCA | |
| GAA | AAA | CAG | CGC | GAA | CAG | ATC | CGC | GCG | ATC | TCA | CTG | GAT | TAC | CCG | GAG | ATC | |
| ACC | ATC | GAA | GAC | GCT | TAC | GCG | GTG | CAG | CGC | GAA | TGG | GTT | CGC | CTG | AAA | ATC | |
| GCC | GAA | GGT | CGC | ACG | CTG | AAA | GGC | CAC | AAA | ATC | GGC | CTG | ACC | TCG | AAA | GCG | |
| ATG | CAG | GCA | AGC | TCG | CAG | ATC | AGC | GAA | CCG | GAT | TAC | GGC | GCG | CTG | CTG | GAT | |
| GAC | ATG | TTC | TTC | CAC | GAT | GGC | AGC | GAT | ATC | CCG | ACC | GAT | CGC | TTT | ATC | GTG | |
| CCG | CGC | ATT | GAA | GTG | GAG | CTG | GCT | TTC | GTG | CTG | GCA | AAA | CCG | CTG | CGT | GGG | |
| CCA | AAC | TGC | ACG | CTG | TTC | GAC | GTC | TAC | AAC | GCC | ACG | GAC | TAC | GTG | ATC | CCG | |
| GCG | CTG | GAG | CTG | ATC | GAC | GCT | CGC | TGC | CAC | AAC | ATC | GAT | CCG | GAA | ACC | CAG | |
| CGC | CCG | CGC | AAA | GTG | TTC | GAC | ACC | ATT | TCT | GAT | AAC | GCC | GCC | AAC | GCC | GGG | |
| GTG | ATC | CTC | GGT | GGT | CGT | CCC | ATT | AAG | CCC | GAT | GAG | TTG | GAT | CTG | CGT | TGG | |
| ATC | TCC | GCC | CTG | ATG | TAT | CGC | AAT | GGC | GTG | ATT | GAA | GAA | ACC | GGC | GTC | GCC | |
| GCT | GGT | GTG | CTG | AAT | CAT | CCG | GCA | AAC | GGC | GTG | GCC | TGG | CTG | GCG | AAC | AAA | |
| CTC | GCA | CCG | TAT | GAC | GTA | CAA | CTG | GAA | GCC | GGG | CAA | ATC | ATT | CTC | GGC | GGT | |
| TCG | TTC | ACC | CGC | CCG | GTT | CCG | GCG | CGT | AAG | GGC | GAC | ACC | TTC | CAC | GTC | GAT | |
| TAC | GGC | AAC | ATG | GGC | TCC | ATT | AGC | TGC | CGC | TTT | GTT | TAA |
|
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