gppA - rhlB sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

TTA ATG CAC TTC CAG CGG CCA GTG GAC ATA GCT CTG CCA CTG GCT TTC CTG

AGC AAT AAT CTC TTT ACC CAG CGG ATG TTG GGT TAG CCA ACC TTG CGG AAG

CGT CAA GGT CAA CAG TTC ATG GTT AGC CTG TAA TGT CAT CTC TGG CAC GAG

ATC GTC ACG GCG ACG GCT GGC AAA AAT GAT GGC CAG GCG TAG TAA ACG GCA

GAG TTG TTC TGC GAG CCG CGG CGG TAC GGC ATT TTG CTG ATG CAG CGA TGA

GAG ATC GAC CGG ATT AGT CTG GTT GAG CAG TAG CGT CGC CAG CAA TTT TTT

CTG TGC GGG GGT AAA ACC GGG AAG ATC CAG ATT ACG CAC CAG ATA AGC AGC

GTG TTG CGG CGC TTG TTT GAA GTC AAC GCT CAG GCC GAT TTC ATG AAG CTG

ACA GGC GCT GAT GAG CAA ATC GCG GCT TAT TGC TTC AAG ATG CCA TTC GTT

TTC CAC CTG ATC GAA GAA GTT AGC CGC AAC TTT GGC TAC GCG CTG TGC CTG

ATC AAT ATC GAT CAT AAA GCG GCG TTG AAT ATT ACG CAG CGT ACG GCT GCG

AAT ATC CTG CTC GAC GGC CAG ATG CAA CAT GCC GTA GAC CAG GCC TTC ACG

CAG CGC ACC GCC CGC CAG GGT CAT ACA CTG AAT ATT CAG TTC GGT AAA AAT

GGC GAT CAG GAT CGC CAG ACC ACT CGG GAA CAC TAA CGC ACG TTC CAG CGT

CAG CCC GTC AAT CTC CAG TTC CTC CAG CCG ACC GCA ATG AAT GGC TCG CTG

TTT CAA TTG CTG CAA CTT TTC CAG GGT AAT GCG TTC ATC CAT CCC CTG TGC

CAT CAT GAT TTC CTG TAA CGC CTG CAC GGT GCC GGA AGC ACC AAC GCA CAC

TTT CCA GCC GTG ATA CCG TAA TTC ATC GGC AAC CGG ACG TAA CAC TTC GCG

TGC CGC TTT TTC TGC AGC ATC AAA ATT TTC CTG CCC CAG ATT ACG ATC GGC

AAA ATA GCG TTC CAG CCA GGT GAC GCA GCC CAT CGA CAG GCT GAA CAA CGA

GGT GGT TTG TGC ACC CGT GCC GGT TAC CAG TTC AGT ACT GGC TCC GCC TAT

ATC CAC CAC CAG GCG CTG ATC GGC ACC ACC AGT GGT GTG AGC AAC GCC CTG

ATA AAT CAG ACG TGC TTC CTC TTC ACC GCT GAT CAC CTG TAC CGG ACA ACC

GAG AAT TTC CTG CGC TTT GGC AAT AAA ATC ACC CGC ATT GAC GGC AAG GCG

TAA CCT CGC CGT AGC GAC AAC GCG AAT TTG CGA GGG AGG AAT ATC TTG CAG

ACG TTC AGC AAA CAG GCG CAA ACA TTG CCA ACC GCG CTC CAT TGC TTC ATT

GGA GAG GGC ATT TTC GCT ATT CAG GCC AGC AGC CAG ACG CAC TTT GCG TTT

TAT TCG CGT CAG CGT CTG GAT GCT TCC AGC CAC CTC GCG CAC AAC CAG CAT

ATG AAA ACT ATT CGA ACC GAG ATC AAT GGC TGC ATA CAG CGA CGA GGT GGA

ACC CAT

ACTCTTCATCCTTCAATCTGTCTCTGTGTTGGCTGCATTCTTTCACCTGAATCACTTACTA

CAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTA

TGACATTTTTTAT

TTA ACC TGA ACG ACG ACG ATT ACG CGG AGC GCC AGT ACG ACG CGG ACC ATT

GCC TGT GCG CGG GCG CGT GAG GCG CAG CGG TTT TGG CAG ATC GGT CAT CAA

TGC GTC CGG ATT GTA TTT GCT TAC CGG AAT TGA GTG ACC AAT ATA GGT CTC

AAT AGC AGG CAA ATT CAA TGC ATA CTC TTC ACA CGC CAG GCT GAT AGA GTG

ACC GCT TGC GCC TGC GCG ACC TGT ACG ACC AAT ACG GTG AAC GTA ATC TTC

ACA GTC ATC GGG TAA ATC GTA GTT AAA GAC GTG CGT CAC TGC CGG AAT ATG

CAA ACC ACG CGC GGC AAC GTC GGT GGC AAC CAG AAT ATC CAG ATC GCC ACG

GGT AAA TTC ATC AAG AAT ACG CAG ACG TTT TTT CTG CGC GAC ATC GCC TGT

CAA TAA ACC GAC ACG ATG ACC ATC TGC TGC CAG GTG GCC CCA GAT CTC TTC

ACA ACG GTG TTT GGT GTT GGC GAA AAT AAT CGC TCT GTC TGG CCA CTC TTC

TTC GAT CAG CGT TTG CAG CAA ACG CAT TTT TTC TTC GTT AGA AGG GTA GAA

AAG CTC TTC TTT AAT ACG GTG GCC CGT TTT CTG TTC CGG TTC CAC TTC AAT

ATA TTC GGC ATT GTT CAT CTG CTC GAA CGC CAG TTC ACG TAC CCG GTA CGA

AAG CGT GGC GGA GAA CAG CAT GTT GAG GCG CTG GTT TGC AGG CGG CAT ACG

GCG GAA CAG CCA GCG GAT ATC TTT AAT AAA GCC CAG ATC GTA CAT GCG ATC

GGC TTC GTC CAG TAC CAC CAC CTG AAT GGC ACC GAG GTT AAT GTG GTT CTG

CTT GGC GTA GTC AAT TAA ACG CCC CGT GGT GCC AAT CAG AAT GTC AAC GCC

GCT TTC CAG CAC TTT CAG CTG TTT GTC GTA GCC ATC ACC ACC GTA AGC CAG

ACC CAG CTT CAG GCC AGT AGC TTC CGC CAG CGG TTC TGC GTC GGC ATG GAT

CTG CAC GGC AAG TTC ACG CGT CGG TGC CAT AAT TAA GGC ACG CGG CTG ATT

CAC CTT GCG ATC GGC AAT CGC AGG ATG AGA GAG AAG ATA ATG AAA CGT TGA

CGT AAG AAA CGC CAT CGT TTT CCC GGT ACC GGT TTG CGC CTG CCC GGC TAC

GTC ACG ACC CGC CAG CGT CAG CGG AAG GGC CAG TGC CTG AAT GGG CGT ACA

GTT ATG AAA CCC TTT TTT TTC AAG GGC TTC TAC AAC CTT CGG ATG CAG GGC

GAA GTC GGA AAA CTT CTG TTC TGT TAA ATG TGT TTT GCT CAT

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

gppA - rhlB sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.