folA - apaH sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | ATC | AGT | CTG | ATT | GCG | GCG | TTA | GCG | GTA | GAT | CGC | GTT | ATC | GGC | ATG | GAA | |
| AAC | GCC | ATG | CCG | TGG | AAC | CTG | CCT | GCC | GAT | CTC | GCC | TGG | TTT | AAA | CGC | AAC | |
| ACC | TTA | AAT | AAA | CCC | GTG | ATT | ATG | GGC | CGC | CAT | ACC | TGG | GAA | TCA | ATC | GGT | |
| CGT | CCG | TTG | CCA | GGA | CGC | AAA | AAT | ATT | ATC | CTC | AGC | AGT | CAA | CCG | GGT | ACG | |
| GAC | GAT | CGC | GTA | ACG | TGG | GTG | AAG | TCG | GTG | GAT | GAA | GCC | ATC | GCG | GCG | TGT | |
| GGT | GAC | GTA | CCA | GAA | ATC | ATG | GTG | ATT | GGC | GGC | GGT | CGC | GTT | TAT | GAA | CAG | |
| TTC | TTG | CCA | AAA | GCG | CAA | AAA | CTG | TAT | CTG | ACG | CAT | ATC | GAC | GCA | GAA | GTG | |
| GAA | GGC | GAC | ACC | CAT | TTC | CCG | GAT | TAC | GAG | CCG | GAT | GAC | TGG | GAA | TCG | GTA | |
| TTC | AGC | GAA | TTC | CAC | GAT | GCT | GAT | GCG | CAG | AAC | TCT | CAC | AGC | TAT | TGC | TTT | |
| GAG | ATT | CTG | GAG | CGG | CGG | TAA |
|
| TTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTC |
| CTATATCAGGCTGTGT
|
| TTA | AGA | CGC | CGC | CGC | TTC | GCC | CAA | ATC | CTT | ATG | CCG | GTT | CGA | CGG | CTG | GAC | |
| AAA | ATA | CTG | TTT | ATC | TTC | CCA | GCG | CAG | GCA | GGT | TAA | TGT | ACC | ACC | CCA | GCA | |
| GCA | GCC | GGT | ATC | CAG | CGC | GTA | TAT | ACC | TTC | CGG | CGT | ACC | TTT | GCC | CTC | CAG | |
| CGA | TGC | CCA | GTG | ACC | AAA | GGC | GAT | GCT | GTA | TTC | TTC | AGC | GAC | AGG | GCC | AGG | |
| AAT | CGC | AAA | CCA | CGG | TTT | CAG | TGG | GGC | AGG | GGC | CTC | TTC | CGG | CGA | TTC | TTT | |
| GCT | GTA | CAT | ATC | CAG | TTG | ACC | GTT | CGG | GAA | GCA | AAA | ACG | CAT | ACG | GGT | AAA | |
| AGC | GTT | GGT | GAT | AAA | ACG | CAG | TCT | TCC | CAG | CCC | CCG | CAA | TTC | CGG | TGA | CCA | |
| GTT | ATT | TGG | CAT | ATC | GCC | GTA | CAT | GGC | ATC | AAG | AAA | GAA | GGG | ATA | GGA | GTC | |
| ACT | CGA | TAG | CAC | CGC | TTC | TAC | ATC | GCG | TGC | GCA | CTC | TTT | GGC | GGT | CTG | CAG | |
| ATC | CCA | CTG | CGG | CGT | GAT | CCC | TGC | GTG | GGC | CAT | CAC | CAG | CTT | TTT | CTC | TTC | |
| GTC | GAT | TTG | CAG | CAG | AGG | CTG | GCG | CCG | CAG | CCA | GTT | AAG | CAG | CTC | GTC | GGC | |
| ATC | CGG | CGC | TTC | CAG | CAG | CGG | TGT | CAG | GCG | ATC | TTT | CGG | TTT | ATT | GCG | GCT | |
| GAT | CCC | GGC | AAA | TAC | CGC | CAG | CAG | ATG | CAG | ATC | GTG | ATT | GCC | CAG | CAC | CAG | |
| ACG | TAC | GCT | GTC | GCC | TAA | GGA | TTT | CAC | ATA | GCG | CAG | AAC | ATC | CAG | CGA | ACC | |
| CGG | CCC | GCG | CGC | GAC | CAG | ATC | GCC | CGT | CAG | CCA | GAG | GGT | ATC | TTT | CCC | AGG | |
| GGT | AAA | TTC | TAC | TTT | ATG | CAG | CAA | TGC | GAT | CAG | TTC | ATC | GTA | ACA | ACC | ATG | |
| AAC | GTC | GCC | AAT | AAG | GTA | TGT | CGC | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.