fimH - gntP sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG AAA CGA GTT ATT ACC CTG TTT GCT GTA CTG CTG ATG GGC TGG TCG GTA

AAT GCC TGG TCA TTC GCC TGT AAA ACC GCC AAT GGT ACC GCT ATC CCT ATT

GGC GGT GGC AGC GCC AAT GTT TAT GTA AAC CTT GCG CCC GTC GTG AAT GTG

GGG CAA AAC CTG GTC GTG GAT CTT TCG ACG CAA ATC TTT TGC CAT AAC GAT

TAT CCG GAA ACC ATT ACA GAC TAT GTC ACA CTG CAA CGA GGC TCG GCT TAT

GGC GGC GTG TTA TCT AAT TTT TCC GGG ACC GTA AAA TAT AGT GGC AGT AGC

TAT CCA TTT CCT ACC ACC AGC GAA ACG CCG CGC GTT GTT TAT AAT TCG AGA

ACG GAT AAG CCG TGG CCG GTG GCG CTT TAT TTG ACG CCT GTG AGC AGT GCG

GGC GGG GTG GCG ATT AAA GCT GGC TCA TTA ATT GCC GTG CTT ATT TTG CGA

CAG ACC AAC AAC TAT AAC AGC GAT GAT TTC CAG TTT GTG TGG AAT ATT TAC

GCC AAT AAT GAT GTG GTG GTG CCT ACT GGC GGC TGC GAT GTT TCT GCT CGT

GAT GTC ACC GTT ACT CTG CCG GAC TAC CCT GGT TCA GTG CCA ATT CCT CTT

ACC GTT TAT TGT GCG AAA AGC CAA AAC CTG GGG TAT TAC CTC TCC GGC ACA

ACC GCA GAT GCG GGC AAC TCG ATT TTC ACC AAT ACC GCG TCG TTT TCA CCT

GCA CAG GGC GTC GGC GTA CAG TTG ACG CGC AAC GGT ACG ATT ATT CCA GCG

AAT AAC ACG GTA TCG TTA GGA GCA GTA GGG ACT TCG GCG GTG AGT CTG GGA

TTA ACG GCA AAT TAT GCA CGT ACC GGA GGG CAG GTG ACT GCA GGG AAT GTG

CAA TCG ATT ATT GGC GTG ACT TTT GTT TAT CAA TAA

AGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCAC

GTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCA

CTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGG

GCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTT

TTA CGC TAC CAT GCT AAT AAT CAG CAC AAT AAT CAG CCC AAC CAC GGA GTT

GAC CAG CTC CAG CAG ACC CCA GGT TTT CAA CGT GTC TTT TAC TGA CAG GTC

AAA GTA ACC TTT GAA CAA CCA GAA AGA TGC ATC GTT AAT GTG GGT GAG GGT

GTT GGA ACC CGC AGC CGT CGC CAG TAC CAG CAG CGC CGG ATT CAC GCC AAC

CAG CTG ACC AGT TGC TGG ATC TAG GAT TGC AGC ACT GAT AAT CCC GGC GGC

GGT CAT CGC CGA AAC GAC ACC CTG ACC CGT CGC CAG ACG AAT TAG CAC AGT

GAT CAG CCA TGC CAT GAT GTA GGG CGA GAT ATT GCC GTG GGA CAT CAA CAT

GCC GAT GGT GTC GCC AAT GCC GGT GTC GAT GAT GGT CTG CTT CAG CAC GCC

ACC CGC ACC GAT GAT CAG AAT CAC CAT TGC AAT ACT CTT CAC CGC GCT TTC

AAA AGC GTT CAT CAC CCA CTG CAT GTC ATG ACC ACG TGC GGT GCC AAA GAG

TAC GAA TGC AAC CAC CAT CGC AAT AAA CAT TGC AAT CGG CGA GGA ACC GAT

AAA GTT AAC CAC TTC CCA GGC AGG GGT ATC TTT TAC CAG CCA GAT ATT GGC

GAT GGT GGT AGA GAT CAT AAT GAT CGC CGG GAT CAG CGG CAC CAG AAT CGA

AAC GCC GAA AGA GGG CAG ATT ATT CAT ATC TAC CGG TTG ATC TGC TTT CAG

GAA TGA TGG CGT TGG GCG CTC AAG ATT GCC GAG GAA CTT CGG CAG GAT CAG

ACC TGC GCA GAT TAC ACT TGG GAT CGT CAC CAG TAC GCC ATA GAT ATA AAC

CAT CCC CAT ATC CGC GCC ATA AGC ATT CAC CAG CGC CAC CGG ACC CGG CTG

CGG TGG GAA CAG TGA ATG TGC GGT AGT GGC AGC TGC TAC TGC CGG GAT CGC

CAG TTT CAG GAA CGG AAT TTT AGC TTC GGC GGC AAT AAC AAT AAC CAG CGG

CGC TAA CAT GAT AAA GGC CAC TTC ATA GAA CAT CGC CAG ACC AAA AAT CAG

GCC GAT GAT AAT CAC CGA CAG CTG TAC ATA GCG CAG ACC GAG ACG CGC CAG

CAG CGT ATG CGC TAT CTG GTG AGC CGC GCC GGA GTC GAC CAT CAA TTT ACC

GAT GAC CGC ACC GAA CAC CAC GAT GAT AGC CAG TTC CCC CAG CGT GTT GCC

GAA GCC CGC TTT CAT AGT GTG CAG CAG CGA CAT CAA ATC CAT GCC CGC CAG

CAT CCC GAC GGA CAG CGC CGC CAC CAA CAA AGC CAC CAT TGA ATT GAT TTT

GAA CTT CAA ATT CAG TAC CAG CAT CAG ACC AAT GCC GAA TAC CAC CCA GAG

AAT GTT AAG CAC ATG CAT

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

fimH - gntP sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.