exo - fucO sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| TTG | CGA | GGC | CTC | TTC | CCG | ATT | TCT | CAT | CCA | GCC | GTA | GCC | TGT | TCC | GGC | ATC | |
| GAA | TGT | TAC | CCT | TAT | CGC | CTG | ATC | TTT | AAG | GGG | GTT | ATC | GTG | GCT | GTT | CAT | |
| TTG | CTT | ATT | GTC | GAT | GCA | CTG | AAT | CTT | ATT | CGT | CGC | ATT | CAT | GCC | GTT | CAG | |
| GGG | TCG | CCC | TGT | GTC | GAA | ACC | TGC | CAG | CAT | GCG | CTC | GAT | CAG | CTC | ATT | ATG | |
| CAC | AGC | CAG | CCA | ACC | CAC | GCG | GTC | GCC | GTT | TTT | GAT | GAT | GAA | AAC | CGC | AGT | |
| AGC | GGC | TGG | CGT | CAT | CAG | CGT | TTA | CCA | GAT | TAC | AAA | GCG | GGT | CGA | CCG | CCA | |
| ATG | CCG | GAA | GAG | TTG | CAC | GAC | GAG | ATG | CCT | GCA | TTA | CGC | GCC | GCC | TTT | GAG | |
| CAA | CGC | GGC | GTC | CCG | TGC | TGG | TCA | ACC | AGC | GGC | AAC | GAA | GCC | GAT | GAC | TTA | |
| GCC | GCC | ACG | CTG | GCG | GTC | AAA | GTG | ACA | CAG | GCC | GGG | CAT | CAG | GCA | ACG | ATT | |
| GTT | TCG | ACA | GAT | AAA | GGC | TAC | TGT | CAG | TTA | CTT | TCA | CCG | ACA | TTA | CGT | ATT | |
| CGT | GAT | TAC | TTC | CAG | AAA | CGT | TGG | CTG | GAT | GCG | CCA | TTT | ATC | GAT | AAA | GAA | |
| TTT | GGC | GTT | CAA | CCG | CAG | CAG | TTG | CCC | GAT | TAC | TGG | GGA | CTT | GCG | GGG | ATC | |
| AGC | AGT | TCA | AAG | GTA | CCG | GGT | GTT | GCG | GGA | ATC | GGA | CCA | AAA | AGC | GCC | ACG | |
| CAG | CTG | CTG | GTC | GAG | TTT | CAG | AGT | CTG | GAA | GGG | ATA | TAT | GAG | AAT | CTG | GAT | |
| GCG | GTT | GCC | GAA | AAG | TGG | CGC | AAA | AAA | TTA | GAA | ACC | CAT | AAA | GAG | ATG | GCG | |
| TTT | CTG | TGC | CGC | GAT | ATT | GCC | CGC | TTA | CAA | ACC | GAT | TTG | CAT | ATC | GAC | GGC | |
| AAT | TTA | CAG | CAA | TTG | CGG | TTG | GTA | CGG | TAA |
|
| CGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAT
|
| TTA | CCA | GGC | GGT | ATG | GTA | AAG | CTC | TAC | AAT | ATC | CTC | AAG | CGT | TGC | TTC | ACG | |
| CGG | GTT | GCC | ACC | GGT | ACA | AAC | ATC | ATC | CAG | TGC | CGC | CTG | CGC | CAG | TGC | CGG | |
| AAT | GTC | TTC | CTT | GCG | TAC | ACC | AAC | ATC | ACG | CAA | ATG | TGG | CGG | AAT | ACC | GAC | |
| ATC | ACG | GTT | GAG | AGC | AAA | CAC | CGC | TTC | AAC | AGC | GGC | ATT | ACG | CGC | CTC | TTC | |
| CAG | GCT | CAT | ACC | TTC | CAC | TTT | CAC | GCC | CAT | AAC | GCG | CGC | GAT | ATC | GCG | GTA | |
| CTT | CTC | ACC | GGT | AAA | GTC | AGC | GTT | ATA | ACG | CAT | GAC | ATG | CGG | TAA | CAG | GAT | |
| GGC | GTT | CGC | AAC | ACC | GTG | TGG | AGT | GTT | ATA | AAA | CGC | GCC | CAG | TGG | ATG | CGC | |
| CAT | ACC | ATG | CAC | CAA | CCC | TAA | CCC | AAC | ATT | CGA | GAA | GCC | CAT | ACC | CGC | AAC | |
| ATA | CTG | CCC | GAG | CGC | CAT | TTC | TTC | TCC | GGC | ATC | CTT | ATC | ACC | AGC | AAC | CGA | |
| TCC | TCG | CAG | CGC | CCC | AGC | AAT | GAT | TTC | AAT | CGC | TTT | AAT | GTG | CAG | TGC | ATC | |
| GGT | TAG | CGC | CCA | CGC | GCC | ACG | GGT | AAT | ATA | CCC | CTC | AAT | AGC | ATG | AGT | GAG | |
| CGC | ATC | GAC | ACC | CGT | CGC | AGC | TTT | CAG | CGC | TGG | AGG | CAT | ACC | ATC | CAT | CAT | |
| GTC | AGC | GTC | AAT | AAA | CGC | CAC | CTG | CGG | GAT | ATC | ATG | CGG | ATC | AAC | GCA | AAC | |
| AAA | CTT | GCG | CCG | TTT | CTC | TTC | GTC | AGT | GAT | CAC | GTA | GTT | AAT | GGT | CAC | TTC | |
| TGC | CGC | AGT | ACC | TGC | TGT | GGT | AGG | AAT | TGC | CAG | AAT | CGG | TAC | ACT | GGG | TTT | |
| ATT | GGT | CGG | GGA | AAG | CCC | TTC | CAG | GCT | ACG | CAC | ATC | GGC | AAA | CTC | CGG | GTT | |
| GTT | GCT | GAT | AAT | GCC | AAT | CGC | TTT | ACA | AGT | ATC | CTG | TGG | AGA | ACC | ACC | ACC | |
| AAT | AGC | GAT | CAG | GTA | ATC | CGC | GCC | GCT | ATT | CTG | GAA | TAC | ACC | GAG | CCC | TTC | |
| TTT | GAC | GAC | AGT | AAT | TGT | TGG | GTT | GGG | CAC | TAC | GCC | GTC | GTA | AAT | CGC | CCA | |
| TGC | CAG | CCC | TGC | AGC | ATC | CAT | CTT | ATC | GGT | CAC | TTT | CGC | CAC | CAC | GCC | GCA | |
| TTG | CAC | CAG | CGT | TTT | ATC | GGT | GAC | GAT | CAG | CGC | CTT | CTG | ATA | ACC | ACG | GCG | |
| TTT | CAC | CTC | ATC | GGT | TAA | AGC | CCC | AAC | AGC | ACC | CCG | ACC | AAA | CCA | TGC | CGT | |
| TTC | GTT | CAG | AAT | CAT | TCT | GTT | AGC | CAT | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.