| Flanking genes | BIME typea | Repeats size | Identity | Sequence (from Y to Z1) |
|---|---|---|---|---|
| barA - f446 | BIME-1 | 25 - 25 | 64% | AATCGGCTTTTTATGACGCTGGTTT---B AACCGGCTCCAGATAGAGCCGGTTT |
| f205 - gldA | BIME-1 | 25 - 25 | 76% | AAATTCCTGAACAACGTGGGAGTTT-16 bp-Y AAACTCCCGGACAAGCCGGGAGTTT |
| f268 - mltA | BIME-1 | 20 - 20 | 90% | AGGGTGAGGGGTAACCTCAC ATC---B AGGGTGAGGGATAACCTCGC |
| f289 - f342 | BIME-1 | 21 - 21 | 86% | TTAAACTTCCCAGTTTAATGA---B TTTAACTTCCCTGTTTAATCA |
| fdnI - f120 | BIME-1 BIME-1 |
34- 34 -34 | 97% (1-2) 82% (1-3) |
AAATGGCGCTGTAAAAGGCGCCATTTT---B AAATGGCGCTGTAAAAGGCGTCATTTT---B AAATGGCGCTTTATAAAGTGCCATTTT |
| glnS - o468 | atypicalb | 23 - 23 | 74% | GCGTTTTGGATTGTTTGCTGTTT---Y GCGTTTGAAACTGTTTGTCTGTT |
| katE - ydjC | BIME-1 | 22 - 22 | 86% | AGGCGGCGCAATTGCGCCGCCT---B AAGCGGCGCAGTTACGCCGCCT |
| mgtA - f141 | atypical | 25 - 25 | 84% | TAAACTGGGCACGATAGCCCCGATT---B TAATCCGGGCATGATAGCCCGGATT |
| mtlA - mtlD | BIME-1 | 27 - 27 | 78% | ACCCAAACCCTCTCCGTGAGGAGAGGG---Y AACCCCACCTTCTCCATGTGGAGAGGG |
| narP - ccmH | BIME-1 | 25 - 25 | 84% | GCCCGATGGTGATGCCATCGGGC---B GCCCGATGATAAATCCATCGGGC |
| o1120 - ybaM | BIME-1 | 21 - 19 | 76% | GGGGCAACATTTAGTTGCCCC---B GGGG--ACATTTAGCGACCCC |
| o215 - aspC | BIME-1 | 21 - 19 | 81% | AGCCCGCTTTTAATGCTGGCC---B AGCCCGCTTTTCA-GC-GGGC |
| o310 - f541 | BIME-1 | 28 - 28 | 100% | AGGCCGGGTGGGTAATACCATCCGGCCA---B AGGCCGGGTGGGTAATACCATCCGGCCA |
| o375 - artJ | BIME-1 | 18 - 18 | 83% | AAGCCGCATGTGCGGCTT---B AAGCCGCGGTTGCGGCTT |
| o463 - f308 | BIME-1 | 30 - 30 | 93% | AGGCCAGGCAGTAACATTACTGACTGGCCT---B AGACCAGCCAGTAACATTACTGACTGGCCT |
| o502 - gusC | BIME-1 | 31 - 31 | 90% | ATAACGCCGGAGAGAAAAATCTCCGGCGTTT---B AAAACGCCGGAGTGAAAATTCTCCGGCGTTT |
| o76 - f464 | BIME-1 | 22 - 23 | 87% | AACCGCCGGGGTTACCGGCGGTG---B AACCACCGGG-TAACCGGCGGTG |
| pfkA - sbp | BIME-1 | 19 - 19 | 74% | AGGCGGAAGAAATCCGCCT---B AGGGTAAAGGAATCTGCCT |
| pitA - uspB | BIME-1 | 23 - 27 | 85% | CGAGCGGGTCAG----CTGGCCCGCTT---B CGAGCGGGTCAGTTTACTGGCCCGCTT |
| srmB - yfiE | BIME-1 | 25 - 25 | 80% | TAATGTCGGGATTAAACCCGGCATT---B TAATACCAGGCTTAAACCTGGCATT |
| ybgB - cydA | BIME-1 | 18 - 18 | 78% | AAGCCACATATGCGCGGC---B AAGCCACGTATATGTGGC |
| yggB - fda | BIME-1 | 42 - 44 | 86% | TTGCTTTTGGCGAAAAAA-TCCCCGCAGAGCGGGGCTC-AGACA---B TTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATA |
| yhaC - rnpBc | BIME-1 | 19 - 20 | 65% | AAACC-GTTCCGGCGGGTTT---B AAACCCGCGTCAGTGAGTTT |
a All these BIMEs are either BIME-1 or atypical BIMEs containing a Z1 motif. b The repeats cover part of the "r" and "B" motifs, and are bracketing the BIME-1 part of this atypical BIME. c This region contains a much longer repeat : between the BIME and rnpB gene are found a truncated repeat of 53 bp and 3 occurrences of a 113 bp repeat (the last one overlapping rnpB by 90 bp), while on the other side of the BIME, 30 bp are similar to part of the longer repetition.
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