dedA - truA sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| TTA | TTT | TGC | GGC | GCG | TGC | CGC | AGC | GCG | TTT | GTG | ACG | GAT | TAT | TTC | GAT | GAC | |
| GCC | CGG | CAA | AAT | AGA | AAC | CAC | AAT | AAT | CCC | GAC | GAT | CAG | CAG | CTT | AAG | GTT | |
| ATC | CTG | AAC | CAT | CGG | GAT | TGT | ACC | GAA | GAA | ATA | GCC | TGC | GTA | GGT | AAA | AAG | |
| CAG | TAC | CCA | CAA | CAG | TGC | GCC | GAT | CAC | GTT | ATA | AGC | GGC | GAA | ATG | ACG | GTA | |
| CGA | CAT | GTG | GCC | CAT | TCC | CGC | AAC | AAA | CGG | GGC | GAA | CGT | TCT | GAC | GAT | CGG | |
| CAC | AAA | ACG | GGC | GAG | AAT | AAT | CGT | TTT | GCC | GCC | ATG | TTT | CTC | ATA | AAA | CTG | |
| ATG | GGT | TTT | GTC | GAG | ATA | ACT | GCG | ACG | GAA | AAT | TTT | CGA | ATT | GGG | ATT | ACT | |
| GAA | CAA | CTT | TTC | ACC | GAA | CAA | CCG | CCC | GAT | AGT | GTA | ATT | GAC | CGC | GTC | ACC | |
| CAC | AAT | CGC | GGC | GAT | CAG | CAT | CAG | CAC | CAC | CAT | CAT | ATG | GAC | GTT | GAG | ATC | |
| GTT | GGT | TTC | CAG | TGA | TGC | CAA | CGC | TCC | GGC | AAC | AAA | CAG | CAA | TGA | ATC | ACC | |
| CGG | TAA | AAA | CGG | CGT | TAC | CAC | CAG | ACC | GGT | TTC | ACA | GAA | CAA | AAT | TAA | GAA | |
| CAA | AAT | GGC | ATA | AAC | CCA | GAC | GCC | GTA | CTC | CGC | GAC | CAG | CTC | TGC | CAG | ATG | |
| CAC | GTC | AAT | GTG | CAG | GAT | AAA | ATC | GAT | GAG | GAA | ATA | AAT | CAG | GTC | CAT |
|
| ATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCC FONT>TGAA |
| ATGTTCCGAGCATTATTCTCG
|
| TTA | GTC | CGC | CAG | AAA | TAG | CGG | GCC | CAT | TGG | CGG | TTT | TGG | AAG | ATC | ATA | CCG | |
| GTC | AGG | GTA | ATC | CAC | CGC | GAC | CAG | ATA | CAG | CCC | TTC | CGC | TTT | TGC | CGT | TGC | |
| TGC | CGC | CAG | CGT | TCT | GTC | CTT | TGC | CGC | CAG | CAA | CTC | TGC | TAT | CCA | GCT | CTC | |
| CGG | CTG | GTT | GTG | GGC | ACC | GAC | TTC | CAT | CAG | GCT | GCC | GAC | AAT | ATT | CCT | GAC | |
| CAT | ATG | ATG | TAC | AAA | AGC | ATT | CGC | TTT | AAT | ATC | TAC | CAC | CAC | ATA | AGG | ACC | |
| GTG | ACG | CGT | GAC | ATT | AAT | ATG | CAT | AAC | GTT | GCG | CCA | CGG | GGT | TCG | GGA | CTG | |
| GCA | CTG | CAC | CGC | ACG | GAA | CGA | GGT | GAA | ATC | ATT | CTC | GCC | CAG | CAA | GCA | TTG | |
| CGC | AGC | CCG | ATG | CAT | CCG | TTC | AGC | GTC | CAG | CGG | TTC | GTA | AAA | ATG | GGT | TAC | |
| CCC | TTT | ACT | CAG | TAC | CGC | CGG | GCG | CAG | CCG | ATG | ATT | GTA | GAT | GAT | GTA | GCG | |
| ATA | ACG | GCG | AGC | CGT | GGC | GCT | AAA | TCG | GGC | ATG | AAA | ATC | ATC | AGG | TAC | AGT | |
| TTT | AAC | CCA | ACG | CAC | AGC | GAT | GTC | ACC | AGG | TAA | ATT | CGC | ATT | TAC | GCC | CAA | |
| GGT | CCA | CGC | CGC | GTC | TTT | GCG | CAG | CGC | GGT | TGT | TTC | GAA | ATG | CAC | AAC | CTG | |
| CCC | GGT | ACC | GTG | TAC | CCC | TGC | GTC | AGT | ACG | CCC | GGC | GCA | GAA | GAC | GGT | GAT | |
| GGG | TTC | GTT | CGC | CAC | CTG | GGA | GAG | CGC | CTT | TTC | CAG | CTT | CTC | CTG | CAC | ACT | |
| GCG | GAC | TTC | GTT | CTG | CCG | TTG | CCA | GCC | GTA | ATA | CTT | ACT | GCC | GTC | GTA | CTC | |
| AAT | GCC | CAG | CGC | AAT | TTT | ATA | AAC | TGG | CGG | TTG | TTG | CTG | GTC | GGA | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.