caiF - caiE sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| GTG | AAG | TTG | CAT | ACT | ATC | GAT | ATA | TCC | ACA | ATT | TTA | ATA | TGG | CCT | TGT | TTA | |
| ATT | GCT | TCA | AAA | CGA | GTC | ATA | GCC | AGA | CTT | TTA | ATT | TGT | GAA | ACT | GGA | GTT | |
| CGT | ATG | TGT | GAA | GGA | TAT | GTT | GAA | AAA | CCA | CTC | TAC | TTG | TTA | ATC | GCC | GAA | |
| TGG | ATG | ATG | GCT | GAA | AAT | CGG | TGG | GTG | ATA | GCA | AGA | GAG | ATC | TCT | ATT | CAT | |
| TTC | GAT | ATT | GAA | CAC | AGC | AAG | GCG | GTT | AAT | ACC | CTG | ACT | TAT | ATT | CTG | TCG | |
| GAA | GTC | ACA | GAA | ATA | AGC | TGC | GAA | GTT | AAG | ATG | ATC | CCT | AAT | AAG | CTG | GAA | |
| GGG | CGG | GGA | TGC | CAG | TGT | CAG | CGA | CTG | GTT | AAA | GTG | GTC | GAT | ATC | GAT | GAG | |
| CAA | ATT | TAC | GCG | CGC | CTG | CGC | AAT | AAC | AGT | CGG | GAA | AAA | TTA | GTC | GGT | GTA | |
| AGA | AAG | ACG | CCG | CGT | ATT | CCT | GCC | GTT | CCG | CTC | ACG | GAA | CTT | AAC | CGC | GAG | |
| CAG | AAG | TGG | CAG | ATG | ATG | TTG | TCA | AAG | AGT | ATG | CGT | CGT | TAA |
|
| TTTTATCTCGTTGATACCGGGCGTCCTGCTTGCCAGATGCGATGTTGTAGCATCTTATCCA |
| GCAACCAGGTCGCATCCGGCAAGA
|
| TCA | CCG | TTT | AGG | CGT | CAC | ATC | CGT | CGT | CCC | CTG | CAA | ACG | GGG | GCG | ATT | TTC | |
| CTC | CAT | TTG | CCT | CAG | TGG | CTG | CGT | TTC | ATG | TAA | CGA | TAC | ATG | ACA | GCG | CCC | |
| GAC | AAG | ATC | CTG | ATA | CTC | TTT | GGT | ATT | CAA | CCG | TTT | CCA | GTG | TAA | CTC | GTC | |
| GTC | ACT | AAC | ATT | GCG | TAC | AGC | GCG | GGC | TGG | CGT | ACC | CAT | CAA | CAA | CTG | GCG | |
| TTT | CTC | GCC | GCG | AAA | GCC | CGC | TTT | GAC | AAA | GCT | CAT | GGC | GGC | AAC | AAT | GCT | |
| CTC | TTC | GCC | AAT | GAC | CGC | GCC | ATC | CAT | AAT | CAC | GCT | GTT | CAT | CCC | GAC | CAA | |
| TGC | ATC | GCG | ACC | AAT | CAA | ACA | ACC | ATG | CAG | GAT | CGC | TCC | GTG | CCC | GAT | ATG | |
| GCC | GTT | TTC | CCC | AAC | GAT | AGT | GTC | AGT | GTC | GCA | GTA | GCC | ATG | CAT | AAT | GCA | |
| GCC | ATC | CTG | AAT | ATT | GGC | TCC | CGC | TTG | CAC | GAT | CAA | CCG | CCC | GTA | GTC | ACC | |
| ACG | CAG | TGA | GGC | GAG | TGG | GCC | GAT | GTA | GAC | ACC | GGC | TCC | CAC | AAT | CAC | ATC | |
| GCC | AAT | CAA | GAC | GGC | ACT | GGG | ATG | GAC | AAA | CGC | CGT | CGG | GTG | AAC | CAC | CGG | |
| AAT | TAA | CCC | CTC | AAA | GGC | GTA | ATA | GCT | CAC | GGT | TGT | TAA | CGT | CCT | TTC | CAC |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.