ascB - hycI sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | TCA | GTA | TTT | CCA | GAA | AGT | TTT | TTA | TGG | GGC | GGC | GCG | CTT | GCC | GCC | AAC | |
| CAG | TCT | GAA | GGT | GCG | TTC | CGT | GAA | GGT | GAC | AAA | GGT | CTG | ACC | ACT | GTC | GAT | |
| ATG | ATC | CCA | CAC | GGC | GAG | CAT | CGA | ATG | GCG | GTG | AAA | CTG | GGG | CTG | GAA | AAA | |
| CGT | TTT | CAG | TTG | CGA | GAT | GAC | GAG | TTT | TAT | CCC | AGC | CAT | GAG | GCG | ACG | GAT | |
| TTT | TAT | CAT | CGT | TAT | AAA | GAA | GAT | ATC | GCC | CTG | ATG | GCA | GAG | ATG | GGA | TTC | |
| AAG | GTT | TTC | CGT | ACC | TCA | ATT | GCC | TGG | AGC | CGT | CTC | TTT | CCG | CAG | GGC | GAT | |
| GAA | ATC | ACG | CCC | AAT | CAG | CAG | GGC | ATT | GCT | TTT | TAT | CGT | TCT | GTC | TTT | GAA | |
| GAG | TGT | AAA | AAG | TAC | GGT | ATC | GAA | CCG | CTG | GTC | ACG | TTG | TGC | CAC | TTC | GAT | |
| GTG | CCG | ATG | CAT | CTG | GTC | ACC | GAA | TAT | GGC | TCC | TGG | CGT | AAC | CGC | AAG | CTG | |
| GTG | GAG | TTT | TTC | AGC | CGC | TAC | GCC | AGA | ACC | TGC | TTT | GAA | GCA | TTT | GAT | GGT | |
| CTG | GTG | AAA | TAC | TGG | CTA | ACC | TTC | AAT | GAA | ATC | AAC | ATT | ATG | TTG | CAT | AGC | |
| CCG | TTC | TCC | GGC | GCG | GGT | CTG | GTG | TTT | GAA | GAA | GGT | GAA | AAT | CAG | GAT | CAG | |
| GTG | AAA | TAT | CAG | GCC | GCG | CAT | CAC | CAG | CTG | GTT | GCC | AGT | GCG | CTA | GCC | ACC | |
| AAA | ATC | GCC | CAT | GAG | GTT | AAC | CCG | CAA | AAT | CAG | GTG | GGC | TGT | ATG | CTG | GCG | |
| GGC | GGT | AAC | TTC | TAC | CCT | TAC | AGT | TGC | AAG | CCG | GAA | GAT | GTC | TGG | GCG | GCG | |
| CTG | GAG | AAA | GAC | CGG | GAA | AAC | CTG | TTT | TTT | ATC | GAT | GTG | CAG | GCG | CGG | GGC | |
| ACG | TAT | CCG | GCT | TAC | TCT | GCC | CGC | GTA | TTC | CGC | GAA | AAA | GGG | GTA | ACC | ATC | |
| AAC | AAA | GCA | CCG | GGC | GAT | GAT | GAA | ATC | CTG | AAA | AAC | ACC | GTC | GAT | TTT | GTC | |
| TCT | TTC | AGC | TAT | TAC | GCC | TCG | CGC | TGC | GCC | TCG | GCG | GAG | ATG | AAC | GCC | AAC | |
| AAC | AGC | AGT | GCG | GCG | AAC | GTG | GTG | AAA | TCG | CTG | CGT | AAT | CCG | TAT | CTA | CAG | |
| GTG | AGC | GAC | TGG | GGC | TGG | GGA | ATT | GAT | CCA | CTC | GGT | CTG | CGT | ATC | ACC | ATG | |
| AAT | ATG | ATG | TAC | GAT | CGT | TAT | CAG | AAG | CCG | CTG | TTT | CTG | GTG | GAA | AAC | GGC | |
| CTG | GGC | GCA | AAA | GAT | GAA | TTT | GCT | GCC | AAT | GGC | GAG | ATT | AAC | GAC | GAC | TAT | |
| CGC | ATC | AGC | TAC | TTA | CGC | GAA | CAT | ATC | CGC | GCA | ATG | GGC | GAA | GCG | ATT | GCA | |
| GAC | GGC | ATT | CCG | CTG | ATG | GGC | TAC | ACC | ACA | TGG | GGC | TGT | ATT | GAT | TTA | GTT | |
| TCC | GCC | TCT | ACG | GGT | GAA | ATG | AGC | AAA | CGC | TAC | GGC | TTT | GTC | TTT | GTT | GAC | |
| CGT | GAC | GAC | GCA | GGC | AAC | GGT | ACG | CTG | ACG | CGC | ACG | CGT | AAG | AAA | TCA | TTC | |
| TGG | TGG | TAT | AAA | AAA | GTG | ATT | GCC | AGT | AAT | GGG | GAA | GAT | TTA | GAG | TAG |
|
| GTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAA |
| GGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCA |
| TCAAGAACATCCCTGTCCTGATTCCTTAATGAAAAA
|
| CTA | CTC | TTC | TTC | CAC | CGC | TAA | CTG | CGC | GAA | GCC | GCC | ATT | TCC | TTC | CCA | GCC | |
| TTC | CAG | TCG | TTG | ATA | AAC | GGT | TTC | TAC | CGC | ATC | TTT | AAT | CGG | CTG | GGT | CAT | |
| CGG | GTA | GTA | AAA | GCC | GAC | GAT | ATC | CGG | CTG | AAT | GCC | GAG | GAA | AAT | CAC | TTC | |
| GCC | AAT | ATC | TTC | TTT | CAA | CTG | GTC | GAT | AAG | GTA | ATT | CAA | CGG | CAT | GTT | ATG | |
| GGT | AGT | CAT | CAT | AAA | CAT | CTC | GGC | GAT | ATC | ATC | CGG | GTC | GAT | GAT | GCG | GAT | |
| CTC | GCC | GGG | GTT | TAG | CCC | CAT | ATC | CGT | GGC | GTC | GAC | AAT | CAG | CAG | TCG | TGT | |
| CGG | GCG | CAG | TTC | ACG | GAT | AGC | GAC | GAT | GTC | GTT | TTC | CGG | TGC | GCT | ACC | GCC | |
| GTC | AAT | CAC | CAC | CCA | GTT | ACC | TTT | CGG | CGC | GGC | GGC | GCA | CTT | TTC | CGC | CAG | |
| CAG | CGG | ACC | TGC | GCC | ATC | ATC | GCC | CAT | CAT | GCT | ATT | GCC | AAC | ACA | GAG | TAA | |
| AAC | GTC | AGT | CAC |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.