arcC - purK sequence
Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.
| ATG | AAA | ACA | CTG | GTT | GTG | GCT | CTT | GGG | GGC | AAC | GCC | TTA | CTC | CAG | CGC | GGT | |
| GAG | GCG | CTG | ACG | GCA | GAA | AAT | CAA | TAT | CGC | AAT | ATC | GCC | AGT | GCT | GTA | CCC | |
| GCG | CTG | GCA | CGC | CTG | GCC | CGT | TCT | TAT | CGG | TTG | GCG | ATT | GTT | CAC | GGC | AAC | |
| GGG | CCG | CAG | GTG | GGG | CTG | CTG | GCA | TTG | CAG | AAT | CTG | GCG | TGG | AAA | GAG | GTA | |
| GAA | CCG | TAT | CCG | CTG | GAT | GTG | CTG | GTT | GCG | GAA | AGC | CAG | GGG | ATG | ATT | GGC | |
| TAT | ATG | CTG | GCG | CAG | AGT | TTG | AGC | GCA | CAG | CCG | CAG | ATG | CCG | CCC | GTG | ACG | |
| ACG | GTG | CTG | ACG | CGC | ATT | GAG | GTT | TCG | CCT | GAT | GAT | CCG | GCG | TTT | TTG | CAG | |
| CCA | GAG | AAA | TTT | ATT | GGT | CCG | GTT | TAT | CAG | CCA | GAA | GAA | CAA | GAG | GCA | CTG | |
| GAA | GCG | GCT | TAC | GGC | TGG | CAG | ATG | AAA | CGT | GAT | GGT | AAA | TAT | TTG | CGC | CGG | |
| GTG | GTG | GCG | TCT | CCG | CAA | CCG | CGT | AAA | ATT | CTC | GAC | AGC | GAA | GCC | ATC | GAG | |
| TTG | TTG | CTC | AAA | GAG | GGG | CAT | GTG | GTG | ATT | TGC | AGT | GGC | GGC | GGC | GGT | GTG | |
| CCT | GTG | ACG | GAT | GAC | GGA | GCA | GGG | AGT | GAA | GCA | GTG | ATT | GAT | AAA | GAT | CTC | |
| GCC | GCT | GCG | TTG | CTC | GCC | GAG | CAG | ATT | AAT | GCA | GAT | GGA | CTG | GTG | ATC | CTC | |
| ACC | GAT | GCT | GAT | GCG | GTA | TAT | GAA | AAC | TGG | GGA | ACG | CCG | CAG | CAA | CGT | GCC | |
| ATT | CGC | CAT | GCC | ACA | CCG | GAT | GAG | TTA | GCG | CCA | TTT | GCC | AAA | GCC | GAT | GGT | |
| TCG | ATG | GGG | CCG | AAT | GTA | ACG | GCG | GTG | AGT | GGT | TAT | GTC | AGA | AGC | CGT | GGT | |
| AAA | CCC | GCG | TGG | ATT | GGG | GCG | TTA | TCG | CGA | ATT | GAA | GAG | ACG | CTG | GCG | GGC | |
| GAA | GCG | GGG | ACC | TGT | ATT | TCG | CTG | TAG |
|
| TCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAC |
| CGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAG |
| GCCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAA |
| TAGAGCACCAG
|
| TTA | ACC | GAA | CTT | ACT | CTG | CGC | CCA | AAT | CAC | GCC | GCT | GGC | ATA | TTC | CGG | CGG | |
| CAG | CAG | CGG | GAT | TAA | GGC | TTC | CAG | CGT | CGC | AGT | CAG | ACG | CGA | TGT | GTC | GCT | |
| GTC | GGT | CAA | ATT | CAG | ATG | CCC | CAC | TTT | ACG | CCC | CGG | ACG | GAC | TTC | TTT | GTC | |
| GTA | CCA | GTG | CAG | ATG | CAC | CAG | CGG | CAG | TTT | CAG | CCA | GTC | ATA | ATT | CAC | ATC | |
| GCT | ACC | AAT | CAG | ATT | GAT | CAT | CAC | CGA | CGG | ATT | ATT | CAC | CAC | TGG | TTG | CGG | |
| TAA | CGG | CAG | ATC | GGT | AAT | CGC | CCG | CAG | ATG | CAG | CTC | AAA | CTG | GCT | GAT | GCT | |
| GGC | ACC | GTT | TTG | TGT | CCA | GTG | ACC | GCT | GTT | ATG | CAC | ACG | CGG | TGC | CAG | TTC | |
| GTT | GAT | CAA | CAG | ACC | TTG | CGG | GGT | GAC | AAA | ACA | CTC | CAT | CGC | CAT | CAC | GCC | |
| CAC | ATA | GCC | CAG | CTC | CTG | CAT | AAT | CGC | CGA | CAG | CAT | CTC | TTC | GGC | TTG | CGC | |
| CTG | CTG | CTG | TGC | GTT | GGC | CTG | CGG | AAA | AGC | GAC | GCT | GGT | GCG | CAA | AAT | ACC | |
| GTC | CTG | ATG | CAG | GTT | ATG | CGT | CAG | CGG | ATA | AAA | CAC | GGT | GCT | GCC | ATC | AAA | |
| GCC | GCG | CGC | GCC | AAC | CAG | CGA | CAC | TTC | ACC | AGA | GAA | GTT | AAT | GCC | CTG | CTC | |
| GAC | AAT | ACA | TTC | GCC | GTA | ACA | CTC | TGC | CGG | TAA | CTG | TTC | GGT | TTC | ATT | TGC | |
| GCG | TAA | ACG | CCA | TTG | ACC | GCG | ACC | GTC | ATA | ACC | ACC | AGT | GCG | ACG | CTT | AAC | |
| AAT | CGC | CAG | CTC | ACC | TAA | ACG | ATC | AAA | CAC | CGC | AGG | CCA | CTC | GCT | GCG | TTC | |
| GGC | AAG | TAA | CTG | CCA | CGG | TGC | AGT | CGG | CAG | GTG | GAG | CTT | ATC | GAA | AAG | CTG | |
| CTT | CTG | AGT | CAG | ACG | GTC | AGC | AAT | AAT | CGG | GAA | CAC | ATC | GCG | GTT | CAC | AAA | |
| GGC | CGG | ATG | GCG | CGC | CAG | CTC | GCG | GGT | TAA | TGC | GGT | TTC | CGG | CCA | GCG | TTC | |
| TAT | CTC | AGC | GGT | AAT | CAC | GCT | TTG | TTG | AAA | AGG | CAC | CGC | CGC | CGG | TTC | AGC | |
| GTC | CAG | CCC | GAC | TGG | CCA | GAC | AGC | AAT | GCC | TAA | CGG | TTC | GCC | TGC | CTG | ACG | |
| CAG | CAT | ACG | GCC | TAA | CTG | CCC | GTT | ACC | GAG | GAC | GCA | AAC | CTG | TTT | CAT |
|
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Please send questions and comments to Sophie.Bachellier@pasteur.fr.