ahpC - ahpF sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG TCC TTG ATT AAC ACC AAA ATT AAA CCT TTT AAA AAC CAG GCA TTC AAA

AAC GGC GAA TTC ATC GAA ATC ACC GAA AAA GAT ACC GAA GGC CGC TGG AGC

GTC TTC TTC TTC TAC CCG GCT GAC TTT ACT TTC GTA TGC CCG ACC GAA CTG

GGT GAC GTT GCT GAC CAC TAC GAA GAA CTG CAG AAA CTG GGC GTA GAC GTA

TAC GCA GTA TCT ACC GAT ACT CAC TTC ACC CAC AAA GCA TGG CAC AGC AGC

TCT GAA ACC ATC GCT AAA ATC AAA TAT GCG ATG ATC GGC GAC CCG ACT GGC

GCC CTG ACC CGT AAC TTC GAC AAC ATG CGT GAA GAT GAA GGT CTG GCT GAC

CGT GCG ACC TTC GTT GTT GAC CCG CAG GGT ATC ATC CAG GCA ATC GAA GTT

ACC GCT GAA GGC ATT GGC CGT GAC GCG TCT GAC CTG CTG CGT AAA ATC AAA

GCA GCA CAG TAC GTA GCT TCT CAC CCA GGT GAA GTT TGC CCG GCT AAA TGG

AAA GAA GGT GAA GCA ACT CTG GCT CCG TCT CTG GAC CTG GTT GGT AAA ATC

TAA

ATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTAC

TTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGA

AATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAG

CTGCATCCAGGTAGCCGCAGAGGCCGCTTGC

ATG ATG ATG TTT AAA GCC CAG GAG ATA AAC ATG CTC GAC ACA AAT ATG AAA

ACT CAA CTC AAG GCT TAC CTT GAG AAA TTG ACC AAG CCT GTT GAG TTA ATT

GCC ACG CTG GAT GAC AGC GCT AAA TCG GCA GAA ATC AAG GAA CTG TTG GCT

GAA ATC GCA GAA CTG TCA GAC AAA GTC ACC TTT AAA GAA GAT AAC AGC TTG

CCG GTG CGT AAG CCG TCT TTC CTG ATC ACC AAC CCA GGT TCC AAC CAG GGG

CCA CGT TTT GCA GGC TCC CCG CTG GGC CAC GAG TTC ACC TCG CTG GTA CTG

GCG TTG CTG TGG ACC GGT GGT CAT CCG TCG AAA GAA GCG CAG TCT CTG CTG

GAG CAG ATT CGC CAT ATT GAC GGT GAT TTT GAA TTC GAA ACC TAT TAC TCG

CTC TCT TGC CAC AAC TGC CCG GAC GTG GTG CAG GCG CTG AAC CTG ATG AGC

GTA CTG AAC CCG CGC ATC AAG CAC ACT GCA ATT GAC GGC GGC ACC TTC CAG

AAC GAA ATC ACC GAT CGC AAC GTG ATG GGC GTT CCG GCA GTG TTC GTA AAC

GGG AAA GAG TTT GGT CAG GGC CGC ATG ACG TTG ACT GAA ATC GTT GCC AAA

ATT GAT ACT GGC GCG GAA AAA CGT GCG GCA GAA GAG CTG AAC AAG CGT GAT

GCT TAT GAC GTA TTA ATC GTC GGT TCC GGC CCG GCG GGT GCA GCG GCA GCA

ATT TAC TCC GCA CGT AAA GGC ATC CGT ACC GGT CTG ATG GGC GAA CGT TTT

GGT GGT CAG ATC CTC GAT ACC GTT GAT ATC GAA AAC TAC ATT TCT GTA CCG

AAG ACT GAA GGG CAG AAG CTG GCA GGC GCA CTG AAA GTT CAC GTT GAT GAA

TAC GAC GTT GAT GTG ATC GAC AGC CAG AGC GCC AGC AAA CTG ATC CCA GCA

GCA GTT GAA GGT GGT CTG CAT CAG ATT GAA ACA GCT TCT GGC GCG GTA CTG

AAA GCA CGC AGC ATT ATC GTG GCG ACC GGT GCA AAA TGG CGC AAC ATG AAC

GTT CCG GGC GAA GAT CAG TAT CGC ACC AAA GGC GTG ACC TAC TGC CCG CAC

TGC GAC GGC CCG CTG TTT AAA GGT AAA CGC GTA GCG GTT ATC GGC GGC GGT

AAC TCC GGC GTG GAA GCG GCA ATT GAC CTG GCG GGT ATC GTT GAG CAC GTA

ACG CTG CTG GAA TTT GCG CCA GAA ATG AAA GCC GAC CAG GTT CTG CAG GAC

AAA CTG CGC AGC CTG AAA AAC GTC GAC ATT ATT CTG AAT GCG CAA ACC ACG

GAA GTG AAA GGC GAC GGC AGC AAA GTC GTT GGT CTG GAA TAT CGA GAT CGT

GTC AGC GGC GAT ATT CAC AAC ATC GAA CTG GCC GGT ATT TTC GTC CAG ATT

GGT CTG CTG CCG AAC ACC AAC TGG CTC GAA GGC GCA GTC GAA CGT AAC CGC

ATG GGC GAG ATT ATC ATT GAT GCG AAA TGC GAA ACC AAC GTG AAA GGC GTG

TTC GCA GCG GGT GAC TGT ACG ACG GTT CCG TAC AAG CAG ATC ATC ATC GCC

ACT GGC GAA GGT GCC AAA GCC TCT CTG AGT GCT TTT GAC TAC CTG ATT CGC

ACC AAA ACT GCA TAA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

ahpC - ahpF sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.