aceF - lpdA sequence

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.

ATG GCT ATC GAA ATC AAA GTA CCG GAC ATC GGG GCT GAT GAA GTT GAA ATC

ACC GAG ATC CTG GTC AAA GTG GGC GAC AAA GTT GAA GCC GAA CAG TCG CTG

ATC ACC GTA GAA GGC GAC AAA GCC TCT ATG GAA GTT CCG TCT CCG CAG GCG

GGT ATC GTT AAA GAG ATC AAA GTC TCT GTT GGC GAT AAA ACC CAG ACC GGC

GCA CTG ATT ATG ATT TTC GAT TCC GCC GAC GGT GCA GCA GAC GCT GCA CCT

GCT CAG GCA GAA GAG AAG AAA GAA GCA GCT CCG GCA GCA GCA CCA GCG GCT

GCG GCG GCA AAA GAC GTT AAC GTT CCG GAT ATC GGC AGC GAC GAA GTT GAA

GTG ACC GAA ATC CTG GTG AAA GTT GGC GAT AAA GTT GAA GCT GAA CAG TCG

CTG ATC ACC GTA GAA GGC GAC AAG GCT TCT ATG GAA GTT CCG GCT CCG TTT

GCT GGC ACC GTG AAA GAG ATC AAA GTG AAC GTG GGT GAC AAA GTG TCT ACC

GGC TCG CTG ATT ATG GTC TTC GAA GTC GCG GGT GAA GCA GGC GCG GCA GCT

CCG GCC GCT AAA CAG GAA GCA GCT CCG GCA GCG GCC CCT GCA CCA GCG GCT

GGC GTG AAA GAA GTT AAC GTT CCG GAT ATC GGC GGT GAC GAA GTT GAA GTG

ACT GAA GTG ATG GTG AAA GTG GGC GAC AAA GTT GCC GCT GAA CAG TCA CTG

ATC ACC GTA GAA GGC GAC AAA GCT TCT ATG GAA GTT CCG GCG CCG TTT GCA

GGC GTC GTG AAG GAA CTG AAA GTC AAC GTT GGC GAT AAA GTG AAA ACT GGC

TCG CTG ATT ATG ATC TTC GAA GTT GAA GGC GCA GCG CCT GCG GCA GCT CCT

GCG AAA CAG GAA GCG GCA GCG CCG GCA CCG GCA GCA AAA GCT GAA GCC CCG

GCA GCA GCA CCA GCT GCG AAA GCG GAA GGC AAA TCT GAA TTT GCT GAA AAC

GAC GCT TAT GTT CAC GCG ACT CCG CTG ATC CGC CGT CTG GCA CGC GAG TTT

GGT GTT AAC CTT GCG AAA GTG AAG GGC ACT GGC CGT AAA GGT CGT ATC CTG

CGC GAA GAC GTT CAG GCT TAC GTG AAA GAA GCT ATC AAA CGT GCA GAA GCA

GCT CCG GCA GCG ACT GGC GGT GGT ATC CCT GGC ATG CTG CCG TGG CCG AAG

GTG GAC TTC AGC AAG TTT GGT GAA ATC GAA GAA GTG GAA CTG GGC CGC ATC

CAG AAA ATC TCT GGT GCG AAC CTG AGC CGT AAC TGG GTA ATG ATC CCG CAT

GTT ACT CAC TTC GAC AAA ACC GAT ATC ACC GAG TTG GAA GCG TTC CGT AAA

CAG CAG AAC GAA GAA GCG GCG AAA CGT AAG CTG GAT GTG AAG ATC ACC CCG

GTT GTC TTC ATC ATG AAA GCC GTT GCT GCA GCT CTT GAG CAG ATG CCT CGC

TTC AAT AGT TCG CTG TCG GAA GAC GGT CAG CGT CTG ACC CTG AAG AAA TAC

ATC AAC ATC GGT GTG GCG GTG GAT ACC CCG AAC GGT CTG GTT GTT CCG GTA

TTC AAA GAC GTC AAC AAG AAA GGC ATC ATC GAG CTG TCT CGC GAG CTG ATG

ACT ATT TCT AAG AAA GCG CGT GAC GGT AAG CTG ACT GCG GGC GAA ATG CAG

GGC GGT TGC TTC ACC ATC TCC AGC ATC GGC GGC CTG GGT ACT ACC CAC TTC

GCG CCG ATT GTG AAC GCG CCG GAA GTG GCT ATC CTC GGC GTT TCC AAG TCC

GCG ATG GAG CCG GTG TGG AAT GGT AAA GAG TTC GTG CCG CGT CTG ATG CTG

CCG ATT TCT CTC TCC TTC GAC CAC CGC GTG ATC GAC GGT GCT GAT GGT GCC

CGT TTC ATT ACC ATC ATT AAC AAC ACG CTG TCT GAC ATT CGC CGT CTG GTG

ATG TAA

GTAAAAGAGCCGGCCCAACGGCCGGCTTTTTTCTGGTAATCTCATGAATGTATTGAGGTTA

TTAGCGAATAGACAAATCGGTTGCCGTTTGTTGTTTAAAAATTGTTAACAATTTTGTAAAA

TACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTT

CTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGG

GGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGA

TAAATATATAGAGGTCATG

ATG AGT ACT GAA ATC AAA ACT CAG GTC GTG GTA CTT GGG GCA GGC CCC GCA

GGT TAC TCC GCT GCC TTC CGT TGC GCT GAT TTA GGT CTG GAA ACC GTA ATC

GTA GAA CGT TAC AAC ACC CTT GGC GGT GTT TGC CTG AAC GTC GGC TGT ATC

CCT TCT AAA GCA CTG CTG CAC GTA GCA AAA GTT ATC GAA GAA GCC AAA GCG

CTG GCT GAA CAC GGT ATC GTC TTC GGC GAA CCG AAA ACC GAT ATC GAC AAG

ATT CGT ACC TGG AAA GAG AAA GTG ATC AAT CAG CTG ACC GGT GGT CTG GCT

GGT ATG GCG AAA GGC CGC AAA GTC AAA GTG GTC AAC GGT CTG GGT AAA TTC

ACC GGG GCT AAC ACC CTG GAA GTT GAA GGT GAG AAC GGC AAA ACC GTG ATC

AAC TTC GAC AAC GCG ATC ATT GCA GCG GGT TCT CGC CCG ATC CAA CTG CCG

TTT ATT CCG CAT GAA GAT CCG CGT ATC TGG GAC TCC ACT GAC GCG CTG GAA

CTG AAA GAA GTA CCA GAA CGC CTG CTG GTA ATG GGT GGC GGT ATC ATC GGT

CTG GAA ATG GGC ACC GTT TAC CAC GCG CTG GGT TCA CAG ATT GAC GTG GTT

GAA ATG TTC GAC CAG GTT ATC CCG GCA GCT GAC AAA GAC ATC GTT AAA GTC

TTC ACC AAG CGT ATC AGC AAG AAA TTC AAC CTG ATG CTG GAA ACC AAA GTT

ACC GCC GTT GAA GCG AAA GAA GAC GGC ATT TAT GTG ACG ATG GAA GGC AAA

AAA GCA CCC GCT GAA CCG CAG CGT TAC GAC GCC GTG CTG GTA GCG ATT GGT

CGT GTG CCG AAC GGT AAA AAC CTC GAC GCA GGC AAA GCA GGC GTG GAA GTT

GAC GAC CGT GGT TTC ATC CGC GTT GAC AAA CAG CTG CGT ACC AAC GTA CCG

CAC ATC TTT GCT ATC GGC GAT ATC GTC GGT CAA CCG ATG CTG GCA CAC AAA

GGT GTT CAC GAA GGT CAC GTT GCC GCT GAA GTT ATC GCC GGT AAG AAA CAC

TAC TTC GAT CCG AAA GTT ATC CCG TCC ATC GCC TAT ACC GAA CCA GAA GTT

GCA TGG GTG GGT CTG ACT GAG AAA GAA GCG AAA GAG AAA GGC ATC AGC TAT

GAA ACC GCC ACC TTC CCG TGG GCT GCT TCT GGT CGT GCT ATC GCT TCC GAC

TGC GCA GAC GGT ATG ACC AAG CTG ATT TTC GAC AAA GAA TCT CAC CGT GTG

ATC GGT GGT GCG ATT GTC GGT ACT AAC GGC GGC GAG CTG CTG GGT GAA ATC

GGC CTG GCA ATC GAA ATG GGT TGT GAT GCT GAA GAC ATC GCA CTG ACC ATC

CAC GCG CAC CCG ACT CTG CAC GAG TCT GTG GGC CTG GCG GCA GAA GTG TTC

GAA GGT AGC ATT ACC GAC CTG CCG AAC CCG AAA GCG AAG AAG AAG TAA

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Please send questions and comments to Sophie.Bachellier@pasteur.fr.

aceF - lpdA sequence

Intergenic regions are in italics. The following repeats are coloured : BOCEs and boxC, BIMEs and PUs , IRUs, RSAs and 29 bp repeats.

Intergenic regions are in italics. The following repeats are coloured :
BOCEs and boxC,
BIMEs and PUs ,
IRUs,
RSAs and 29 bp repeats.