- Research articles and reviews
- Bookchapters

Research articles, reviews and commentaries

2007

Brochet M, Couvé E, Zouine M, Poyart C, Glaser P (2007)A naturally occurring gene amplification leading to sulfonamide and trimethoprim resistance in Streptococcus agalactiae. J Bacteriol.2007 Nov 16; [Epub ahead of print] PubMed

Buchrieser C (2007) Biodiversity of the species Listeria monocytogenes and the genus Listeria. Microbes Infect. 2007 May 6; [Epub ahead of print] PubMed

Severino P, Dussurget O, Vencio RZ, Dumas E, Garrido P, Padilla G, Piveteau P, Lemaitre JP, Kunst F, Glaser P, Buchrieser C (2007) Comparative transcriptome analysis of Listeria monocytogenes strains of the two major lineages reveals differences in virulence, cell wall and stress response. Appl Environ Microbiol. 2007 Aug 17; [Epub ahead of print] PubMed

Tiaden A, Spirig T, Weber SS, Bruggemann H, Bosshard R, Buchrieser C, Hilbi H (2007) The Legionella pneumophila response regulator LqsR promotes host cell interactions as an element of the virulence regulatory network controlled by RpoS and LetA. Cell Microbiol. 2007 Jul 5; [Epub ahead of print] PubMed

Jules M, Buchrieser C. (2007) Legionella pneumophila adaptation to intracellular life and the host response: Clues from genomics and transcriptomics. FEBS Lett May 21; [Epub ahead of print] PubMed

Steinert M, Heuner K, Buchrieser C, Albert-Weissenberger C, Glockner G. (2007) Legionella pathogenicity: Genome structure, regulatory networks and the host cell response. Int J Med Microbiol Apr 26; [Epub ahead of print] PubMed

Hain T, Chatterjee SS, Ghai R, Kuenne CT, Billion A, Steinweg C, Domann E, Karst U, Jansch L, Wehland J, Eisenreich W, Bacher A, Joseph B, Schar J, Kreft J, Klumpp J, Loessner MJ, Dorscht J, Neuhaus K, Fuchs TM, Scherer S, Doumith M, Jacquet C, Martin P, Cossart P, Rusniock C, Glaser P, Buchrieser C, Goebel W, Chakraborty T. (2007) Pathogenomics of Listeria spp.. Int J Med Microbiol. 2007 May 4; [Epub ahead of print] PubMed

Volokhov DV, Duperrier S, Neverov AA, George J, Buchrieser C, Hitchins AD (2007) Internalin Gene in Natural Atypically Hemolytic Listeria innocua Strains Suggests Descent from L. monocytogenes. Appl Environ Microbiol. Jan 12; [Epub ahead of print] PubMed

2006

Hong E, Doumith M, Duperrier S, Giovannacci I, Morvan A, Glaser P, Buchrieser C, Jacquet C, Martin P. (2006) Genetic diversity of Listeria monocytogenes recovered from infected persons and pork, seafood and dairy products on retail sale in France during 2000 and 2001. Int J Food Microbiol. Dec 22; [Epub ahead of print] PubMed

Doleans-Jordheim A, Akermi M, Ginevra C, Cazalet C, Kay E, Schneider D, Buchrieser C, Atlan D, Vandenesch F, Etienne J, Jarraud S. (2006) Growth-phase-dependent mobility of the lvh-encoding region in Legionella pneumophila strain Paris. Microbiology 152(Pt 12):3561-8. PubMed

Johri AK, Paoletti LC, Glaser P, Dua M, Sharma PK, Grandi G, Rappuoli R. (2006) Group B Streptococcus: global incidence and vaccine development. Nat Rev Microbiol 4(12):932-42 PubMed

Hejnova J, Pages D, Rusniok C, Glaser P, Sebo P, Buchrieser C. (2006) Specific regions of genome plasticity and genetic diversity of the commensal Escherichia coli A0 34/86. Int J Med Microbiol Oct 13; Epub ahead of print PubMed

Doumith M, Jacquet C, Goulet V, Oggioni C, Van Loock F, Buchrieser C, Martin P. (2006) Use of DNA arrays for the analysis of outbreak-related strains of Listeria monocytogenes. Int J Med Microbiol Sep 23; [Epub ahead of print] PubMed

Kathariou S, Graves L, Buchrieser C, Glaser P, Siletzky RM, Swaminathan B. (2006) Involvement of Closely related Strains of a new Clonal Group of Listeria monocytogenes in the 1998-99 and 2002 Multistate Outbreaks of Foodborne Listeriosis in the United States. Foodborne Pathog Dis Fall;3(3):292-302. PubMed

Brueggemann H, Hagman A, Jules M, Sismeiro O, Dillies MA, Gouyette C, Kunst F, Steinert M, Heuner K, Coppee JY, Buchrieser C. (2006) Virulence strategies for infecting phagocytes deduced from the in vivo transcriptional program of Legionella pneumophila . Cell Microbiol Aug 8(8):1228-40 PubMed

Bourdet A, Ciaudo C, Zakin L, Elalouf JM, Rusniok C, Weissenbach J, Avner P. (2006) A SAGE approach to identifying novel trans-acting factors involved in the X inactivation process. Cytogenet Genome Res. 113(1-4):325-35. PubMed

Suspene R, Rusniok C, Vartanian JP, Wain-Hobson S. (2006) Twin gradients in APOBEC3 edited HIV-1 DNA reflect the dynamics of lentiviral replication. Nucleic Acids Res. 34(17):4677-84. Epub 2006 Sep 8. PubMed

Nougayrede JP, Homburg S, Taieb F, Boury M, Brzuszkiewicz E, Gottschalk G, Buchrieser C, Hacker J, Dobrindt U, Oswald E. (2006) Escherichia coli induces DNA double-strand breaks in eukaryotic cells. Science Aug 11;313(5788):848-51 PubMed

Brzuszkiewicz E, Bruggemann H, Liesegang H, Emmerth M, Olschlager T, Nagy G, Albermann K, Wagner C, Buchrieser C, Emody L, Gottschalk G, Hacker J, Dobrindt U. (2006) How to become a uropathogen: Comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains. Proc Natl Acad Sci U S A. 2006 Aug 15; [Epub ahead of print] PubMed

Lamy MC, Dramsi S, Billoet A, Helene-Poupet R, Tazi A, Raymond J, Guerin F, Couve E, Kunst F, Glaser P, Trieu-Cuot P, Poyart C. (2006).Rapid detectionof the "highly virulent" group B streptococcus ST-17 clone. Microbes and Infection April 21; [Epub ahead of print] doi:10.1016/j.micinf.2006.02.008 PubMed

Schuffenecker I, Iteman I, Michault A, Murri S, Frangeul L, Vaney MC, Lavenir R, Pardigon N, Reynes JM, Pettinelli F, Biscornet L, Diancourt L, Michel S, Duquerroy S, Guigon G, Frenkiel MP, Brehin AC, Cubito N, Despres P, Kunst F, Rey FA, Zeller H, Brisse S (2006) Genome microevolution of chikungunya viruses causing the Indian ocean outbreak. PLoS Med Jul;3(7):e263. Epub 2006 May 23 PubMed

Brochet M, Couve E, Zouine M, Vallaeys T, Rusniok C, Lamy MC, Buchrieser C, Trieu-Cuot PT, Kunst F, Poyart C, Glaser P. (2006) Genomic diversity and evolution within the species Streptococcus agalactiae. Microbes and Infection Jan 19; [Epub ahead of print] PubMed

Bruggemann H, Cazalet C, Buchrieser C. (2006) Adaptation of Legionella pneumophila to the host environment: role of protein secretion, effectors and eukaryotic-like proteins. Curr Opin Microbiol. Jan 4; [Epub ahead of print] Pub Med

Herro R, Poncet S, Cossart P, Buchrieser C, Gouin E, Glaser P, Deutscher J. (2006) How Seryl-Phosphorylated HPr Inhibits PrfA, a Transcription Activator of Listeria monocytogenes Virulence Genes. J Mol Microbiol Biotechnol. 9(3-4):224-34. Pub Med

Gaudriault S, Duchaud E, Lanois A, Canoy AS, Bourot S, Derose R, Kunst F, Boemare N, Givaudan A (2006) Whole-Genome Comparison between Photorhabdus Strains To Identify Genomic Regions Involved in the Specificity of Nematode Interaction. J Bacteriol. 188(2):809-14. Pub Med

2005

Vergassola M, Vespignani A, and Dujon B. (2005) Cooperative evolution in protein complexes of yeast from comparative analyses of its interaction network. Proteomics. 5(12):3116-3119 Pub Med

Bourhy P, Frangeul L, Couve E, Glaser P, Saint Girons I, and M Picardeau (2005) Complete Nucleotide Sequence of the LE1 Prophage from the Spirochete Leptospira biflexa and Characterization of Its Replication and Partition Functions J. Bacteriol. 187: 3931-3940. Pub Med

Lalioui L, Pellegrini E, Dramsi S, Baptista M, Bourgeois N, Doucet-Populaire F, Rusniok C, Zouine M, Glaser P, Kunst F, Poyart C, Trieu-Cuot P. (2005) The SrtA Sortase of Streptococcus agalactiae Is Required for Cell Wall Anchoring of Proteins Containing the LPXTG Motif, for Adhesion to Epithelial Cells, and for Colonization of the Mouse Intestine. Infect Immun. 73(6):3342-50 Pub Med

Cazalet C, Buchrieser C. (2005) [What do we learn from the genome of Legionella pneumophila ?] Med Sci (Paris) 21(5):455-457. French. Pub Med

Glaser P. (2005) [DNA-arrays, a breakthrough in bacterial identification ?] Med Sci (Paris) 21(5):539-544. French. Pub Med

Eichinger L, Pachebat JA, Glockner G, Rajandream MA, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov BA, Rivero F, Bankier AT, Lehmann R, Hamlin N, Davies R, Gaudet P, Fey P, Pilcher K, Chen G, Saunders D, Sodergren E, Davis P, Kerhornou A, Nie X, Hall N, Anjard C, Hemphill L, Bason N, Farbrother P, Desany B, Just E, Morio T, Rost R, Churcher C, Cooper J, Haydock S, van Driessche N, Cronin A, Goodhead I, Muzny D, Mourier T, Pain A, Lu M, Harper D, Lindsay R, Hauser H, James K, Quiles M, Madan Babu M, Saito T, Buchrieser C, Wardroper A, Felder M, Thangavelu M, Johnson D, Knights A, Loulseged H, Mungall K, Oliver K, Price C, Quail MA, Urushihara H, Hernandez J, Rabbinowitsch E, Steffen D, Sanders M, Ma J, Kohara Y, Sharp S, Simmonds M, Spiegler S, Tivey A, Sugano S, White B, Walker D, Woodward J, Winckler T, Tanaka Y, Shaulsky G, Schleicher M, Weinstock G, Rosenthal A, Cox EC, Chisholm RL, Gibbs R, Loomis WF, Platzer M, Kay RR, Williams J, Dear PH, Noegel AA, Barrell B, Kuspa A. (2005) The genome of the social amoeba Dictyostelium discoideum. Nature 5;435(7038):43-57. Pub Med

Hejnova J, Dobrindt U, Nemcova R, Rusniok C, Bomba A, Frangeul L, Hacker J, Glaser P, Sebo P, Buchrieser C. (2005) Characterization of the flexible genome complement of the commensal Escherichia coli strain A0 34/86 (O83 : K24 : H31). Microbiology 151(Pt 2):385-98. Pub Med

Mazurie A, Bottani S, Vergassola M. (2005) An evolutionary and functional assessment of regulatory network motifs. Genome Biol. 2005;6(4):R35. Epub 2005 Mar 24. Pub Med

Brugirard-Ricaud K, Duchaud E, Givaudan A, Girard PA, Kunst F, Boemare N, Brehelin M, Zumbihl R. (2005) Site-specific antiphagocytic function of the Photorhabdus luminescens type III secretion system during insect colonization.Cell Microbiol. 7(3):363-371. Pub Med

Nilsson L, Hansen TB, Garrido P, Buchrieser C, Glaser P, Knochel S, Gram L, Gravesen A. (2005) Growth inhibition of Listeria monocytogenes by a nonbacteriocinogenic Carnobacterium piscicola. J Appl Microbiol 98(1):172-83. Pub Med

2004

Glaser P, Boone C. (2004) Genomics Beyond the genome: from genomics to systems biology. Curr Opin Microbiol. 7(5):489-91. Pub Med

Lamy MC, Zouine M, Fert J, Vergassola M, Couve E, Pellegrini E, Glaser P, Kunst F, Msadek T, Trieu-Cuot P and Poyart C. (2004) CovS/CovR of group B streptococcus: a two-component global regulatory system involved in virulence. Mol Microbiol 54(5):1250-68. Pub Med

Schneider G, Dobrindt U, Bruggemann H, Nagy G, Janke B, Blum-Oehler G, Buchrieser C, Gottschalk G, Emody L, Hacker J. (2004) The Pathogenicity Island-Associated K15 Capsule Determinant Exhibits a Novel Genetic Structure and Correlates with Virulence in Uropathogenic Escherichia coli Strain 536. Infect Immun. 72(10):5993-6001 Pub Med

Doumith M, Buchrieser C, Glaser P, Jacquet C, Martin P. (2004) Differentiation of the Major Listeria monocytogenes Serovars by Multiplex PCR. J Clin Microbiol. 42(8):3819-22. Pub Med

Milohanic E, Jonquieres R, Glaser P, Dehoux P, Jacquet C, Berche P, Cossart P, Gaillard JL. (2004) Sequence and Binding Activity of the Autolysin-Adhesin Ami from Epidemic Listeria monocytogenes 4b. Infect Immun. 72(8):4401-9. Pub Med

Brugirard-Ricaud K, Givaudan A, Parkhill J, Boemare N, Kunst F, Zumbihl R, Duchaud E. (2004) Variation in the effectors of the type III secretion system among Photorhabdus species as revealed by genomic analysis. J Bacteriol 186(13):4376-81. Pub Med

Feurer C, Clermont D, Bimet F, Candrea A, Jackson M, Glaser P, Bizet C, Dauga C. (2004) Taxonomic characterization of nine strains isolated from clinical and environmental specimens, and proposal of Corynebacterium tuberculostearicum sp. nov.. Int J Syst Evol Microbiol. 54(Pt 4):1055-61 Pub Med

Arous S, Buchrieser C, Folio P, Glaser P, Namane A, Hebraud M, Hechard Y. (2004) Global analysis of gene expression in an rpoN mutant of Listeria monocytogenes. Microbiology 1502(Pt5): 1581-1590. Pub Med

Trad S, Allignet J, Frangeul L, Davi M, Vergassola M, Couve E, Morvan A, Kechrid A, Buchrieser C, Glaser P, El-Solh N. (2004) DNA macroarray for identification and typing of Staphylococcus aureus isolates. J Clin Microbiol. 42(5): 2054-2064. Pub Med

Hacker J, Hochhut B, Middendorf B, Schneider G, Buchrieser C, Gottschalk G, Dobrindt U. (2004) Pathogenomics of mobile genetic elements of toxigenic bacteria.. Int J Med Microbiol. 293(7-8): 453-461. Pub Med

Derzelle S, Ngo S, Turlin E, Duchaud E, Namane A, Kunst F, Danchin A, Bertin P, Charles JF. (2004) AstR-AstS, a new two-component signal transduction system, mediates swarming, adaptation to stationary phase and phenotypic variation in Photorhabdus luminescens. Microbiology 150(Pt 4):897-910. Pub Med

Gaudriault S, Thaler JO, Duchaud E, Kunst F, Boemare N, Givaudan A. (2004) Identification of a P2-related prophage remnant locus of Photorhabdus luminescens encoding an R-type phage tail-like particle. FEMS Microbiol Lett. 233(2):223-31. Pub Med

Derzelle S, Turlin E, Duchaud E, Pages S, Kunst F, Givaudan A, Danchin A. (2004) The PhoP-PhoQ two-component regulatory system of Photorhabdus luminescens is essential for virulence in insects. J Bacteriol. 186(5):1270-9. Pub Med

Doumith M, Cazalet C, Simoes N, Frangeul L, Jacquet C, Kunst F, Martin P, Cossart P, Glaser P, Buchrieser C. (2004) New Aspects Regarding Evolution and Virulence of Listeria monocytogenes Revealed by Comparative Genomics and DNA Arrays. Infect Immun. Feb; 72(2): 1072-1083. Pub Med

Frangeul L, Glaser P, Rusniok C, Buchrieser C, Duchaud E, Dehoux P, KunstF. (2004) CAAT-Box, Contigs-Assembly and Annotation Tool-Box for genome sequencing projects. Bioinformatics. Pub Med

Marmiesse M, Brodin P, Buchrieser C, Gutierrez C, Simoes N, Vincent V, Glaser P, Cole ST, Brosch R. (2004) Macro-array and bioinformatic analyses reveal mycobacterial core genes, variation in the ESAT-6 gene family and new phylogenetic markers for the Mycobacterium tuberculosis complex. Microbiology. 150: 483-496. Pub Med

2003

Duchaud E, Rusniok C, Frangeul L, Buchrieser C, Givaudan A, Taourit S, Bocs S, Boursaux-Eude C, Chandler M, Charles JF, Dassa E, Derose R, Derzelle S, Freyssinet G, Gaudriault S, Medigue C, Lanois A, Powell K, Siguier P, Vincent R, Wingate V, Zouine M, Glaser P, Boemare N, Danchin A, Kunst F. (2003) The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens Nat Biotechnol. 21(11):1307-13. PubMed

Mashimo T, Glaser P, Lucas M, Simon-Chazottes D, Ceccaldi PE, Montagutelli X, Despres P, Guenet JL. (2003) Structural and functional genomics and evolutionary relationships in the cluster of genes encoding murine 2',5'-oligoadenylate synthetases.Genomics. 82(5):537-52. PubMed

Milohanic E, Glaser P, Coppee JY, Frangeul L, Vega Y, Vazquez-Boland JA, Kunst F, Cossart P, Buchrieser C. (2003) Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA. Mol Microbiol.47(6):1613-1625. PubMed

Jones N, Bohnsack JF, Takahashi S, Oliver KA, Chan MS, Kunst F, Glaser P, Rusniok C, Crook DW, Harding RM, Bisharat N, Spratt BG. (2003) Multilocus sequence typing system for group B Streptococcus. J Clin Microbiol. 41(6):2530-6. PubMed

Dobrindt U, Agerer F, Michaelis K, Janka A, Buchrieser C, Samuelson M, Svanborg C, Gottschalk G, Karch H, Hacker J. (2003) Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays. J Bacteriol. 185(6):1831-40. PubMed

Carmen Buchrieser, Christophe Rusniok, The Listeria Consortium, Frank Kunst, Pascale Cossart and Philippe Glaser. (2003) Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua: clues for evolution and pathogenicity, FEMS Microbiol Lett 207-213. PubMed

Yuen KY, Pascal G, Wong SS, Glaser P, Woo PC, Kunst F, Cai JJ, Cheung EY, Medigue C, Danchin A. (2003) Exploring the Penicillium marneffei genome. Arch Microbiol. 15 PubMed

2002

Derzelle S, Duchaud E, Kunst F, Danchin A, Bertin P. (2002) Identification, characterization, and regulation of a cluster of genes involved in carbapenem biosynthesis in Photorhabdus luminescens. Appl Environ Microbiol. 68(8):3780-9. PubMed

Brillard J, Duchaud E, Boemare N, Kunst F, Givaudan A. (2002) The PhlA hemolysin from the entomopathogenic bacterium Photorhabdus luminescens belongs to the two-partner secretion family of hemolysins.J Bacteriol. 184(14):3871-8. PubMed

Glaser P, Rusniok C, Buchrieser C, Chevalier F, Frangeul L, Msadek T, Zouine M, Couve E, Lalioui L, Poyart C, Trieu-Cuot P, Kunst F. (2002) Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal disease. Mol Microbiol. 45(6):1499-513. PubMed

Dussurget O, Cabanes D, Dehoux P, Lecuit M, Buchrieser C, Glaser P, Cossart P. (2002) Listeria monocytogenes bile salt hydrolase is a PrfA-regulated virulence factor involved in the intestinal and hepatic phases of listeriosis.Mol Microbiol 45(4):1095-106. PubMed

Chetouani F, Glaser P, Kunst F. (2002) DiffTool: building, visualizing and querying protein clusters. Bioinformatics18(8):1143-4. PubMed

Duche O, Tremoulet F, Glaser P, Labadie J. (2002) Salt Stress Proteins Induced in Listeria monocytogenes. Appl Environ Microbiol 68(4):1491-8. PubMed

Brosch R, Gordon SV, Marmiesse M, Brodin P, Buchrieser C, Eiglmeier K, Garnier T, Gutierrez C, Hewinson G, Kremer K, Parsons LM, Pym AS, Samper S, van Soolingen D, Cole ST. (2002) A new evolutionary scenario for the Mycobacterium tuberculosis complex. Proc Natl Acad Sci U S A 99(6):3684-9. PubMed

2001

Marino M, Ramos HC, Hoffmann T, Glaser P, Jahn D. (2001). Modulation of Anaerobic Energy Metabolism of Bacillus subtilis by arfM (ywiD). J Bacteriol 183(23):6815-21. PubMed

Stulke J, Martin-Verstraete I, Glaser P, Rapoport G. (2001). Characterization of glucose-repression-resistant mutants of Bacillus subtilis: identification of the glcR gene. Arch Microbiol 175(6):441-9. PubMed

Martin N, Jaubert J, Glaser P, Szatanik M, Guenet JL. (2001). Genetic and physical delineation of the region overlapping the progressive motor neuropathy (pmn) locus on mouse chromosome 13. Genomics 75(1-3):9-16. PubMed

Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P, Chakraborty T, Charbit A, Chetouani F, Couve E, de Daruvar A, Dehoux P, Domann E, Dominguez-Bernal G, Duchaud E, Durant L, Dussurget O, Entian KD, Fsihi H, Portillo FG, Garrido P, Gautier L, Goebel W, Gomez-Lopez N, Hain T, Hauf J, Jackson D, Jones LM, Kaerst U, Kreft J, Kuhn M, Kunst F, Kurapkat G, Madueno E, Maitournam A, Vicente JM, Ng E, Nedjari H, Nordsiek G, Novella S, de Pablos B, Perez-Diaz JC, Purcell R, Remmel B, Rose M, Schlueter T, Simoes N, Tierrez A, Vazquez-Boland JA, Voss H, Wehland J, Cossart P (2001). Comparative genomics of Listeria species. Science 294(5543) :849-52. PubMed

ST. Cole, C. Buchrieser (2001). Bacterial genomics A plague o' both your hosts. Nature 413(6855):467-470. PubMed

F. Chetouani, P. Glaser, F. Kunst (2001). FindTarget: software for subtractive genome analysis. Microbiology 147(Pt 10):2643-9. PubMed

2000

Cruz Ramos H, Hoffmann T, Marino M, Nedjari H, Presecan-Siedel E, Dreesen O, Glaser P, Jahn D. (2000). Fermentative metabolism of Bacillus subtilis: physiology and regulation of gene expression. J Bacteriol Jun;182(11):3072-80. PubMed

J. Haroche,J. Allignet, C. Buchrieser and N. El Solh (2000). Characterization of a variant of vga(A) conferring resistance to streptogramin A and related compounds. Antimicrob Agents Chemother. 44(9):2271-5. PubMed

F. Garnier, S. Taourit, P. Glaser, P Courvalin, M Galimand (2000). Characterization of transposon tn1549, conferring VanB-type resistance in enterococcus spp. Microbiology, 146 (Pt 6):1481-9
PubMed

R. Brosch, SV. Gordon, C Buchrieser, AS. Pym, T. Garnier and ST. Cole (2000). Comparative genomics uncovers large tandem chromosomal duplications in Mycobacterium bovis BCG Pasteur. Yeast, 17:111-123. PubMed

1999

Bookchapters

2006

2005

2003