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When
you use the databases please remember that the only way for us to provide
continuous support is to show granting agencies that this work is used.
- Collaboration within
the European Union-Japan program
Please
quote: I.
Moszer, L.M. Jones, S. Moreira, C. Fabry & A. Danchin
SubtiList:
the reference database for the Bacillus subtilis genome
Nucleic Acids Research (2002) 30: 62-65
- Collaboration with the
University of Florida and the Yale University
Escherichia coli
K12 (MG1655)
Colibri
Please quote:
C Médigue,
A Viari, A Hénaut, A Danchin
Colibri: a functional data base for the Escherichia
coli genome
Microbiol Rev (1993) 57: 623-654
C.
Médigue, T. Rouxel, P. Vigier, A. Hénaut & A. Danchin
Evidence
for horizontal gene transfer in Escherichia coli speciation.
J. Mol. Biol. (1991) 222: 851-856 
- Collaboration with the
Unit of Genomics of Pathogenic Microorganisms
Please
quote: E.
Duchaud, C. Rusniok, L. Frangeul, C. Buchrieser, A. Givaudan, S. Taourit,
S. Bocs, C. Boursaux-Eude, M. Chandler, J-F. Charles, E. Dassa, R.
Derose, S. Derzelle, G. Freyssinet, S. Gaudriault, C. Médigue,
A. Lanois, K. Powell, P. Siguier , R. Vincent, V. Wingate, M. Zouine,
P. Glaser, N. Boemare, A. Danchin & F. Kunst
The
genome sequence of the entomopathogenic bacterium Photorhabdus
luminescens.
Nature Biotechnol. (2003) 21: 1307-1313
- Collaboration with the
HKU-Pasteur
Research Centre and the
BIOSUPPORT programme
Please
quote: G
Fang, C Ho, YW Qiu, V Cubas, Z Yu, C Cabau, F Cheung, I Moszer, A
Danchin
Specialized
microbial databases for inductive exploration of microbial genome
sequences
BMC Genomics (2005) 6: 14
and the Shanghai Genome
Centre (China)
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Leptospira
interrogans
LAI |
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S.X.
Ren, G. Fu, X.G. Jiang, R. Zeng, Y.G. Miao, H. Xu, Y.X. Zhang,
H. Xiong, G. Lu, L.F. Lu, H.Q. Jiang, J. Jia, Y.F. Tu, J.X. Jiang,
W.Y. Gu, Y.Q. Zhang, Z. Cai, H.H. Sheng, H.F. Yin, Y. Zhang, G.F.
Zhu, M. Wan, H.L. Huang, Z. Qian, S.Y. Wang, W. Ma, Z.J. Yao,
Y. Shen, B.Q. Qiang, Q.C. Xia, X.K. Guo, A. Danchin, I. Saint
Girons, R.L. Somerville, Y.M. Wen, M.H. Shi, Z. Chen, J.G. Xu
& G.P. Zhao
Unique
ph ysiological and pathogenic features of Leptospira interrogans
revealed by whole-genome sequencing
Nature (2003) 422: 888-893 |
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Staphylococcus
epidermidis ATCC 12228 |
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Y.Q.
Zhang, S.X. Ren, H.L. Li, Y.X. Wang, G. Fu, J. Yang, Z.Q. Qin,
Y.G. Miao, W.Y. Wang, R.S. Chen, Y. Shen, Z. Chen, Z.H. Yuan,
G.P. Zhao, D. Qu, A. Danchin & Y.M. Wen
Genome-based
analysis of virulence genes in a non-biofilm-forming Staphylococcus
epidermidis strain (ATCC 12228).
Mol Microbiol. (2003) 49:1577-1593 |
and the Beijing Genome
Centre (China)
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Thermoanaerobacter
tencongensis |
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and Fondaçao de
Amparo a Pesquisa do Estado da Sao Paolo (Brasil)
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Xylella
fastidiosa |
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and also, at the
HKU-Pasteur Research Centre
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Bacillus
anthracis |
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Bacillus
cereus |
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Campylobacter
jejuni |
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Haemophilus
influenzae |
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Neisseria
meningitidis |
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Pseudomonas
aeruginosa |
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Pseudomonas
putida |
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Vibrio
cholerae |
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Vibrio
vulnificus |
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Pseudoalteromonas
haloplanktis TAC125 |
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and a small eucaryote,
the Microsporidion
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Encephalitozoon
cuniculi |
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and more to come...
Bacillus
subtilis (with Teraprot
protein comparisons)
Collaboration with the
University of Versailles Saint-Quentin
Publication:
P.
Nitschké, P. Guerdoux-Jamet, H. Chiapello, G. Faroux, C. Hénaut,
A. Hénaut & A. Danchin
Indigo:
a World-Wide-Web review of genomes and gene functions
FEMS Microbiology Reviews. (1998) 22 : 207-227
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Bacillus
subtilis 168 |
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Escherichia
coli K12 |
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Arabidopsis
thaliana |
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