1) Stoven (*), V., Lallemand, J.Y., Abergel, D., Bouaziz, S., Delsuc, M.A., Ekondzi, A., Guittet, E., Laplante, S., Le Goas, R., Malliavin, T.E., Mikou, A., Reisdorf, C., Robin, M., van Heijenoort, C., Yang, Y. "Insight into protein nuclear magnetic resonance research", Biochimie 72, 531 (1990)
2) Malliavin, T.E., Delsuc (*), M.A. et Lallemand, J.Y. "Compression of Multidimensional Data-sets", J. Magn. Res. 93, 630 (1991)
3) Malliavin, T.E., Delsuc (*), M.A. et Lallemand, J.Y. "Computation of Redfield matrix elements for incomplete NOESY data-sets", J. Biomolec. NMR 2, 349-360 (1992)
4) Malliavin, T.E., Rouh A., Delsuc (*), M.A. et Lallemand, J.Y. "Approche directe de la détermination de structures moléculaires à partir de l'effet Overhauser nucléaire", CRAS série II 315, 653-659 (1992)
5) Reisdorf, C., Malliavin (*), T.E. et Delsuc, M.A. "Accurate estimation of inter-atomic distances in large proteins by NMR", Biochimie 74, 809-813 (1992)
6) Malliavin (*), T.E. et Delsuc, M.A. ``A decomposition of the nOe intensity matrix'', Statistical Mechanics, Protein Structure and Protein-Substrate Interactions, Ed. By S. Doniach, Phenum Press, New York, (1994).
7) Malliavin (*), T.E., Delsuc, M.A. "A decomposition of the nOe intensity matrix", J. Chim. Phys. 91, 639-645 (1994)
8) Malliavin (*), T.E., Delsuc, M.A., Orekhov, V.Y. et Arseniev, A.S. ``An estimate of spin diffusion in a spin subset: Application to iterative distance calculation from 3D 15N NOESY-HMQC'', J. Biomolec. NMR 5, 193-201 (1995)
9) Brissac, C., Malliavin, T.E. et Delsuc (*), M.A., ``Use of the Cadzow procedure in 2D NMR for the reduction of t1 noise'', J. Biomolec. NMR 6, 361-365 (1995)
10) Pons, J.L., Malliavin, T.E. et Delsuc (*), M.A., "Gifa V.4: a complete package for NMR data set processing", J. Biomolec. NMR, 8, 445-452 (1997)
11) Malliavin (*), T.E., Louis, V. et Delsuc, M.A., "The DOSY experiment provides insights into the protegrin-lipid interaction'', J.Chim.Phys., 95, 178-186 (1998)
12a) Delsuc (*), M.A. et Malliavin, T.E., "Maximum entropy processing of DOSY NMR spectra", Anal. Chem., 70, 2146-2148 (1998)
13) Malliavin (*), T.E., Desvaux, H. et Delsuc, M.A., ``Conditions for the Measurement of Quantitative Off--Resonance ROESY Intensities'', Magn. Res. Chem., 36, 801-806 (1998)
14) Malliavin (*), T.E., Pons, J.L. et Delsuc, M.A., "An NMR assignment module implemented in the GIFA NMR processing program", Bioinformatics, 14, 624-631 (1998)
15) Malliavin (*), T.E., Desvaux, H., Aumelas, A., Chavanieu, A. et Delsuc, M.A., "Quantitative measurement of longitudinal and transverse cross--relaxation rates: an application to the analysis of the internal dynamics of ranalexin in water and trifluoroethanol", J. Magn.Reson, 140, 189-199 (1999).
16) Malliavin (*), T.E., Desvaux et Delsuc, M.A., "Quantitative determination of longitudinal and transverse cross-relaxation rates", J. Chim. Phys., 96, 1608-1615 (1999).
17) Barthe, P., Chiche, L., Declerck, N. Delsuc, M.A., Lefèvre, J.F., Malliavin T., Mispelter, J., Stern, M.H., Lhoste, J.M. et Roumestand (*) C. "Refined solution structure and backbone dynamics of 15N-labeled C12A-p8MTCP1 studied by NMR relaxation", J. Biomol. NMR, 15, 271-288 (1999).
18) Malliavin (*), T.E., Barthe P. et Delsuc, M.A., "FIRE: predicting the spatial proximity of protein residues from a 3D HSQC-NOESY", Theor. Chem. Accts, 106, 91-97 (2001).reprint
19) Malliavin (*), T.E., et Giudice, E., "Analysis of peptide rotational diffusion by homonuclear NMR", Biopolymers, 63, 335-342 (2002).
20) Malliavin (*), T.E., Snoussi K., et Leroy, J.L, "The NMR structure of [Xd(C2)]4 investigated by molecular dynamics simulations", Magn. Reson. Chem., 41, 18-25 (2003). reprint
21) Auguin D., Catherinot V., Malliavin (*), T.E., Pons J.L., et Delsuc M.A, "Superpositions of chemical shifts in NMR spectra can be overcome to determine automatically the structure of a protein", Spectroscopy, 17(2-3), 559-568 (2003).
22) Malliavin (*), T.E., Gau J., Snoussi K., et Leroy J.L, "Stability of the i-motif structure is related to the interactions between phosphodiester backbones", Biophys. J. 84, 3838-3847 (2003). reprint
23) Canalia M., Malliavin (*) T.E., Kremer W. et Kalbitzer H.R., "Molecular dynamics simulations of HPr under hydrostatic pressure", Biopolymers 74, 377-388 (2004). preprint
24) Marin A., Malliavin (*) T.E., Nicolas P., et Delsuc M.A. "From NMR chemical shifts to amino acid types: investigation of the predictive power carried by nuclei.", J. Biomolec. NMR 30, 47-60 (2004). reprint
25) Pons (*), J.L., Malliavin T.E., Tramesel D., et Delsuc M.A. "NMRb : A Web-repository for raw NMR data-sets", Bioinformatics, 20, 3707-3709 (2004).
26) Malliavin T.E. "Quantitative analysis of biomolecular NMR spectra: a prerequisite for the determination of the structure and dynamics of biomolecules", Current Organic Chemistry, 10, 555-568 (2006). reprint
27) Bardiaux B., Malliavin (*) T.E., Nilges M. et Mazur A.K. "Comparison of different torsion angle approaches for NMR structure determination", J. Biomol. NMR, 00, 1-15 (2006). reprint
28) Rieping W., Habeck M., Bardiaux B., Bernard A., Malliavin T.E. et Nilges (*) M. "ARIG5: automated NOE assignment and data integration in NMR structure calculation", Bioinformatics 23, 381-382 (2007).
29) Ravel (*) P., Kister G., Malliavin T.E. et Delsuc M.A. "A General algorithm for peak-tracking in multi-dimensional NMR experiment.", J. Biomol. NMR 37, 265-75 (2007).
30) Créty T. et Malliavin (*) T.E. "The conformational landscape of the ribosomal protein S15 and its influence on the protein interaction with 16S RNA.", Biophys. J. 92, 2647-2665 (2007). preprint
31) Laine E, Yoneda J.D., Blondel A. et Malliavin (*) T.E. "The conformational plasticity of calmodulin upon calcium complexation gives a model of its interaction with the oedema factor of Bacillus anthracis.", Proteins 71, 1813-1829 (2008). reprint
32) Markwick P.R., Malliavin T. et Nilges* M. Structural biology by NMR: structure, dynamics, and interactions. PLoS Comput Biol. 4, e1000168 (2008).
33) Martinez* L., Malliavin T.E., Nilges M. et Blondel A. Computer Simulations of Product Dissociation from the Active Site of the Anthrax Edema Factor in Proceedings of From Computational Biophysics to Systems Biology 2008, 19-21 May 2008, Jülich, Germany (2008).
34) Loquet A., Bardiaux B., Gardiennet C., Blanchet C., Baldus M., Nilges M., Malliavin T.E. et Böckmann* A. "3D structure determination of the Crh protein from highly ambiguous solid-state NMR restraints. J Am Chem Soc. 130, 3579-3589 (2008).reprint
35) Nilges* M., Bernard A., Bardiaux B., Malliavin T.E., Habeck M. et Rieping W. "Minimisation of an extended hybrid energy removes human bias and results in more accurate NMR structures.", Structure 16, 305-312 (2008).
36) Malliavin* T.E., Munier-Lehman H. et Stoven V. "Virtual screening of the Guanylate Monophosphate Kinase (GMPK) family: investigating the rules of ligand specificity." Letters in Drug Design & Discovery 5, 319-326 (2008).
37) Bardiaux (*) B., Bernard A., Rieping W., Habeck M., Malliavin T.E. et Nilges M. "Graphical analysis of NMR structural quality and interactive contact map of NOE assignments in ARIA.", BMC Structural Biology 8, 30 (2008). reprint
38) Laine E., Blondel A. et Malliavin* T.E. "Dynamics and energetics: a consensus analysis of the impact of calcium on EF-CaM protein complex.", Biophysical J. 96, 1249-1263 (2009).
39) Bardiaux B., Bernard A., Rieping W., Habeck M., Malliavin* T.E. et Nilges M. "Influence of different assignment conditions on the determination of symmetric homodimeric structures with ARIA.", Proteins 75, 569-585 (2009).
40) Martinez L., Laine E., Malliavin* T.E., Nilges M. et Blondel A. "ATP conformations and ion binding modes in the active site of anthrax edema factor: A computational analysis.", Proteins 77, 971-83 (2009).
41) Rosato* A., Bagaria A., Baker D., Bardiaux B., Cavalli A., Doreleijers J.F., Giachetti A., Guerry P., Gntert P., Herrmann T., Huang Y.J., Jonker H.R., Mao B., Malliavin T.E., Montelione G.T., Nilges M., Raman S., van der Schot G., Vranken W.F., Vuister G.W. et Bonvin A.M. "CASD-NMR: critical assessment of automated structure determination by NMR." Nat Methods. 6, 625-626 (2009).
42) Bardiaux B., Favier A., Etzkorn M., Baldus M., Böckmann A., Nilges M. et Malliavin* T.E. "Simultaneous use of solution, solid-state NMR and X-ray crystallography to study the conformational landscape of the Crh protein during oligomerization and crystallization", Advances and Applications in Bioinformatics and Chemistry 3, 25-38 (2010).
43) Laine, E., Goncalves, C., Karst, J.C., Lesnard, A., Rault, S., Tang, W.J., Malliavin*, T.E., Ladant*, D. et Blondel*, A. "Use of allostery to identify inhibitors of calmodulin-induced activation of Bacillus anthracis edema factor", Proc Natl Acad Sci U S A. 107, 11277-11282 (2010).
44) Laine*, E., Martinez, L., Blondel, A. and Malliavin*, T.E. "Activation of the edema factor of Bacillus anthracis by calmodulin: evidence of an interplay between the EF-calmodulin interaction and calcium binding", Biophys J. 99, 2264-2272 (2010).
45) Bernard, A., Vranken, W.F., Bardiaux, B., Nilges, M. et Malliavin*, T.E. "Bayesian estimation of NMR restraint potential and weights: a validation on a representative set of protein structures", Proteins, sous presse.
Birlirakis, N., Berthault, P., Desvaux, H., Goldman, M., Malliavin, T.E. et Piotto, M. "Off-resonance ROESY: a new 1H-NMR method for the simultaneous study of molecular structure and dynamics", Bruker Report 142, 34-38 (1996).
Malliavin, T.E., et Dardel, F. "Structure des protéines par RMN", Techniques de l'Ingénieur, AF 6 608, 2001.
Catherinot V., Malliavin T.E., Pons J.L., et Delsuc M.A. "L'attribution des spectres RMN: de l'analyse manuelle au traitement automatique", BIOforum International, édition française 2/2002, GIT Verlag.
Catherinot V., Malliavin T.E., Pons J.L., et Delsuc M.A. "The assignment of protein NMR spectra: from manual analysis to automatic processing", BIOforum International, sous presse, GIT Verlag.
Malliavin, T.E. "Simulations de dynamique moléculaire en biochimie", Techniques de l'Ingénieur, AF 6 043, 2003
Delsuc M.A., Malliavin T.E., Marin A. et Mourrain B. "Biologie moéculaire structurale et géométrie", La Science au présent, Encyclopedia Universalis (2007)
Bardiaux B., Malliavin TE, Nilges M, (2011) ARIA for solution and solid-state NMR. Protein NMR Techniques, 3rd Edition. Ed. A. Shekhtman, D. Burz, sous presse
Nilges M, Bardiaux B., Malliavin TE (2010) Protein Structure Calculation using Ambiguous Restraints. Solid State NMR Studies of Biopolymers, McDermott, A.E., Polenova, T. (eds) John Wiley & Sons Ltd., Chichester, UK, 395-404.
Nilges M, Bardiaux B., Malliavin TE (2010) Protein Structure Calculation using Ambiguous Restraints. Encyclopedia of Magnetic Resonance. Mars 2010. DOI:10.1002/9780470034590.emrstm1151