ARIA 1.2 -
A
mbiguous
R
estraints in
I
terative
A
ssignment
Authors: Jens Linge, Sean O'Donoghue, Michael Nilges
Start a new project with data in:
ANSIG format (uncalibrated data)
ARIA .tbl format (uncalibrated data)
ARIA .tbl format (already calibrated data)
NMRView format (uncalibrated data)
PIPP format (uncalibrated data)
Regine format (uncalibrated data)
Sparky format (uncalibrated data)
XEASY format (uncalibrated data)
For editing your run.cns file:
Enter the absolute path of your run.cns file (e.g.
/home/linge/werner/run1/run.cns
):
Documentation:
aria 1.2 manual (local copy of the html version)
aria 1.2 manual (local copy of the pdf version)
aria 1.2 manual (local copy of the postscript version)
ARIA homepage at the Institut Pasteur
.
ARIA mailing list
Publications:
Assigning Ambiguous NOEs with ARIA.
JP Linge, S O'Donoghue and M Nilges
Methods in Enzymology
(2001),
339
, 71-90.
New methods for automated NOE assignment and NMR structure calculation.
JP Linge (2001)
Book on Demand Verlag
ISBN: 383111482X
Refinement of the protein backbone angle psi in NMR structure calculations.
R Sprangers, MJ Bottomley, JP Linge, J Schultz, M Nilges and M Sattler
Journal of Biomolecular NMR
(2000),
16
, 47-58.
The three-dimensional structure of the HRDC domain and implications for the Werner and Bloom syndrome proteins.
Z Liu, MJ Macias, MJ Bottomley, G Stier, JP Linge, M Nilges, P Bork and M Sattler
Structure
(1999),
7
, 1557-1566.
StarDOM: from STAR format to XML.
JP Linge, M Nilges and L Ehrlich
Journal of Biomolecular NMR
(1999),
15
, 169 - 172.
Influence of non-bonded parameters on the quality of NMR structures: a new force-field for NMR structure determination.
JP Linge and M Nilges
Journal of Biomolecular NMR
(1999),
13
, 51 - 59.
Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin.
M. Nilges, M.J. Macias, S.I. O'Donoghue, H. Oschkinat (1997)
Journal of Molecular Biology
269
, 408 - 422.
Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities.
M. Nilges (1995)
Journal of Molecular Biology
245
, 645 - 660.
A calculation strategy for the structure determination of symmetric dimers by 1H NMR.
M. Nilges (1993)
Proteins
17
, 297 - 309.
Please send any suggestions to
Jens Linge
or
Michael Nilges
.