Genomics


  HEADDr BOUCHIER Christiane / bouchier@pasteur.fr
  MEMBERSCRENO Sophie


  Annual Report

The Genomics platform carries out collaborative projects with different teams from the Institut Pasteur which is partly funded by the National Genopoles Network (http://rng.cnrg.fr). These large scale genomics projects are carried out using semi-automated techniques. Although the majority of projects concern the complete genomic sequencing of microorganisms or a low coverage genomic sequence, the platform also carries out sequencing of ESTs (Expressed Sequence Tags) and molecular typing of bacterial strains.

Projects realized in 2006 and current projects:

  • Low coverage genome sequencing of two strains of Candida albicans
    Christophe d'Enfert – Fungal Biology and Pathogenicity Unit

  • Allelic diversity of human microRNAs
    Luis Quintana-Murci – Prevention and Therapy of Human Diseases Unit

  • Partial genome sequencing of Legionella longbeachae, strain NSW150
    Carmen Buchrieser – Genomics of Microbial Pathogens Unit

  • Allelic diversity of Rhabdoviridae
    Hervé Bourhy – Lyssavirus Dynamics and Host Adaptation Provisional Unit

  • Allelic diversity of Plasmodium falciparum
    Odile Puijalon – Parasite Molecular Immunology Unit

  • Study of the immunoglobulin genes organisation of Lama pacos
    Pierre Lafaye – Developmental Genetics and Biochemistry Unit

  • Allelic diversity of human hepatoblastome
    Marie Annick Buendia – Oncogenesis and Molecular Virology Unit

  • Genome sequencing of Helicobacter pylori (MALT lymphoma associated)
    Agnès Labigne – Pathogenesis of Mucosal Bacteria Unit

  • Genome sequencing of E. coli 55989 (collaboration with Genoscope)
    Chantal le Bouguenec – Pathogenesis of Mucosal Bacteria Unit

  • Molecular typing of CIP Bacteria strains
    Chantal Bizet – Institut Pasteur Collection

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  Publications

Publications 2006 of the unit on Pasteur's references database




Activity Reports 2006 - Institut Pasteur
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