Genomic platform (PF1) realize large-scale projects with several teams of Pasteur Institute as part of Genopole programm on Microbiology initiated by the Ministry of Education and Research. Genomic projects have been selected by a steering committee. These projects have been realized following a automation-based protocol. Genomic Platform belongs to Structure and dynamic of genomes department.

Projetcs realized in 2005

Partial genome sequencing of a brasilian strain of Mycobacterium leprae

Nadine Honoré – Unité de Génétique moléculaire bactérienne

Genome sequencing of Streptococcus gallolyticus NEM2135

Patrick Trieu-Cuot– Laboratoire mixte IP-Necker de recherche sur les streptocoques et streptococcies

Low coverage genome sequencing of six strains of yeast

Cécile Fairhead – Unité de Génétique moléculaire des levures

MLST fo strains of Candida albicans

Marie-Elisabeth Bougnoux – Unité postulante Biologie et Pathogénicité fongiques

Allelic diversity of Toll-like receptor family

Luis Quintana-Murci – Unité de prévention et thérapies moléculaires

Current projects

Molecular typing of CIP Bacteria strains

Chantal Bizet – Collection

Allelic diversity of Plasmodium falciparum

Odile Puijalon – Unité d'Immunologie Moléculaire des Parasites

Complete genomic sequence of Microcystis aeruginosa (4,6 Mb)

Nicole Tandeau de Marsac – Unité des Cyanobactéries

Genome sequencing of Leptospira biflexa

Mathieu Picardeau – Unité de Bactériologie moléculaire et médicale

Genome sequencing of Helicobacter pylori (associée à un lymphome du MALT)

Agnés Labigne – Unité de Pathogénie bactérienne des muqueuses

Genome sequencing of E. coli 55989 (collaboration with Genoscope)

Chantal le Bouguenec – Unité de Pathogénie bactérienne des muqueuses

Keywords: High-throughput sequencing, Genome, Sequence analysis