Equipe PFID

Dr Anne Danckaert

Areas of interest/expertise:

Image Analysis, Artificial Neural Networks, 3D Reconstruction, Neuroinformatics.


  • 2014 HDR in Biomathematics
  • 1986-1989 PhD in Image Analysis and Bioinformatics at the University of Paris VII (Jussieu) in the Biomathematics and Biostatistics Department lead by Prof. Valleron
  • 1984-1985 Diploma in Biostatistics and Bioinformatics at the University of Paris VII (Jussieu) in the Biomathematics and Biostatistics Department lead by Prof. Valleron
  • 1980-84 Master in Biochemistry at the University of Orsay


Adam James Schwarz, Anne Danckaert, Torsten Reese, Alessandro Gozzi, George Paxinos, Charles Watson, Emilio V Merlo-Pich, Angelo Bifone, NeuroImage, Volume 32, Issue 2, 15 August 2006, Pages 538-550. A stereotaxic MRI template set for the rat brain with tissue class distribution maps and co-registered anatomical atlas: application to pharmacological MRI

Maud Frieden, Dominic James, Cyril Castelbou, Anne Danckaert, Jean-Claude Martinou and Nicolas Demaurex, Journal of Biochemistry, 2004, Vol. 279, pp: 22704-22714. Ca2+ Homeostasis during Mitochondrial Fragmentation and Perinuclear Clustering Induced by hFis1

Danckaert A., Gonzalez-Couto E., Bollondi L., Thompson N. and Hayes B., Traffic, 2002, Vol.3, pp:66-73. Automated Recognition of Intracellular Organelles in Confocal Microscope Images.

Gonzalez-Couto E., Hayes B. and Danckaert A., Nucleic Acids Research, 2001, Vol.29, No.1, pp:336-339. The Life sciences Global Image Database (GID)

Danckaert A., Chappey C, and Hazout S., Comput Appl Biosci. 1991 Vol.7, No.4, pp: 509-513. ’Size leap’ algorithm: an efficient extraction of the longest common motifs from a molecular sequence set. Application to the DNA sequence reconstruction.



Paxinos G., Danckaert, A., Franklin, KBJ., and Merlo-Pich, E.V., The Society for Neuroscience 34th Annual Meeting San Diego, California, Oct 2004. 3D Reconstruction of The Mouse Brain in Stereotaxic Coordinates

Anne Danckaert, Franck Dorkeld, Manolo Mugnaini & Emilio Merlo Pich, Databasing the brain, Workshop, Oslo, July 1-2, 2001. (http://www.nesys.uio.no/Workshop/index.html) Database of electronic rat-brain maps of gene expression patterns for drug discovery: the case of nicotinic receptors

Anne Danckaert, Bioinformatics Workshop, Madrid, March 25-26, 1999 Classification of Rat Brain Sections by Neural Network

A. Danckaert, D. Talabot-Ayer, M. Peistch, N. Guex, J. Knowles, F.E. Bloom and E. Merlo Pich, 26th Annual Meeting - Washington, D.C. Nov 1996 Algorithms for Automatic structure identification in a 3-D Rat Brain Altlas developed as Template for in situ Hybridization Neuroanatomical Database.


Anne Danckaert and Laurent Bollondi, Patent PS3971, 18th October 2001, International Application Published under the patent cooperation treaty (PCT/WO 01/78009 A2) Quantitative Analysis of Biological Images.