Prof. Patrick Forterre - publications
PUBLICATIONS DANS DES JOURNAUX A COMITE DE LECTURE
1 - FORTERRE P., MILEWSKI E., KOHIYAMA M., ROISIN M.P et KEPES A.
"Isolement d'une activité ATPasique inhibée par l'acide nalidixique chez Escherichia coli".
C. R. Acad. Sci. Paris, 278, 2-7 (1975).
2 - FORTERRE P. and KOHIYAMA M.
"Evidence for the existence of two steps in DNA replication obtained in toluene treated Escherichia coli".
Eur. J. Biochem. 90, 537-546 (1978).
3 - FORTERRE P.
"Model for the supercoiling reaction catalyzed by DNA gyrase".
J. Theor. Biol. 82, 255-269 (1980).
4 - BADET B., HUGUES P., KOHIYAMA M. and FORTERRE P.
"Inhibition of DNA replication in vitro by pefloflaxin".
FEBS Letters, 145, 355-359 (1982).
5 - FORTERRE P., SQUALI F.Z., HUGUES P. and KOHIYAMA M.
"Studies on the role of dam methylation at the Escherichia coli chromosome replication origin (oriC)".
Adv. Exptl. Biol. Med. 179, 543-549 (1984).
6 - HUGUES P., SQUALI F.Z., FORTERRE P. and KOHIYAMA M.
"In vitro replication of a dam methylated and non methylated oriC plasmid".
J. Mol. Biol., 175, 155-159 (1984).
7 - BARBEYRON T., KEAN K. and FORTERRE P.
"DNA adenine methylation of GATC sequences appeared recently in Escherichia coli lineage".
J. Bacteriol. 160, 586-590 (1984).
8 - FORTERRE P., ELIE C. and KOHIYAMA M.
"Aphidicolin inhibits growth and DNA synthesis in halophilic archaebacteria".
J. Bacteriol. 159, 800-802 (1984).
9 - MIRAMBEAU G., DUGUET M. and FORTERRE P.
"ATP dependent DNA topoisomerase from the archaebacteria Sulfolobus acidocaldarius".
J. Mol. Biol., 179, 559-563 (1984).
10 - FORTERRE P., MIRAMBEAU G., JAXEL C. NADAL M. and DUGUET M.
"High positive supercoiling in vitro catalyzed by an ATP and polyethylene glycol-stimulated topoisomerase from Sulfolobus acidocaldarius".
EMBO J. 4, 2123-2128 (1985).
11 - FORTERRE P., NADAL M., ELIE C., JAXEL C., MIRAMBEAU G. and DUGUET M.
"Mechanisms of DNA synthesis and topoisomerisation in archaebacteria ; reverse gyration in vitro and in vivo".
System. Appl. Microbiol. 7, 67-71 (1986).
12 - NADAL M., MIRAMBEAU G., FORTERRE P., REITER W.D. and DUGUET M.
"Positively supercoiled DNA in a virus-like particle of an archaebacterium".
Nature, 321, 256-258 (1986).
13 - SIOUD M., BALDACCI G., FORTERRE P. and DE RECONDO A.M.
"Antitumoral drugs inhibit the growth of halophilic archaebacteria".
Eur. J. Biochem. 169, 231-236 (1987).
14 - SIOUD M., FORTERRE P. and DE RECONDO A.M.
"Effect of the antitumoral drug VP 16 on the 1.7 kb plasmid of the archaebacterium Halobacterium GRB".
Nucleic Acids Res. 15, 8217-8234 (1987).
15 - SIOUD M., POSSOT O., ELIE C., SIBOLD L. and FORTERRE P.
"Coumarins and quinolones action in archaebacteria : evidence for the presence of a DNA gyrase-like enzyme".
J. Bacteriol. 170, 946-953 (1988).
16 - SIOUD M., BALDACCI G., DE RECONDO A.M. and FORTERRE P.
"Novobiocin induces positive supercoiling of small plasmids from halophilic archaebacteria".
Nucleic acids res. 16, 1379-1392 (1988).
17 - SIOUD M., BALDACCI G., FORTERRE P. and DE RECONDO A.M.
"Novobiocin induces accumulation of a single strand of plasmid pGRB-1 in the archaebacterium Halobacterium GRB".
Nucl. Acids Res. 16: 7833-7842. (1988).
18 - SIOUD M., BALDACCI G., DE RECONDO A.M. and FORTERRE P.
"Inhibitors of DNA topoisomerase II induce topological changes in an archaebacterial plasmid in vivo".
Biochemical Pharmacol. 37, 1879-1880 (1988).
19 - NADAL M., JAXEL C., PORTEMER C., FORTERRE P., MIRAMBEAU G. and DUGUET M.
"The reverse gyrase of Sulfolobus: Purification to homogeneity and characterization". Biochemistry. 27, 9102-9108 (1988).
20 - ELIE C., SALHI S., ROSSIGNOL J.M., FORTERRE P. and DE RECONDO, A.M.
"DNA polymerase from a thermoacidophilic archaebacterium: evolutionary and technological interest".
Biophysica Biochemica Acta, 951, 261-267 (1988).
21 - ELIE C., DE RECONDO A.M. and FORTERRE P.
"Thermostable DNA polymerase from the archaebacterium Sulfolobus acidocaldarius: Purification, characterization and obtention of polyclonal antibodies".
Eur. J. Biochem.178, 619-626 (1989).
22 - SIOUD M., and FORTERRE P.
"Ciprofloxacin and etoposide (VP16) produce similar pattern of cleavage in a plasmid of an archaebacterium".
Biochemistry, 28:3638-3641 (1989).
239 - SALHI S., ELIE C., FORTERRE P., DE RECONDO A.M. and ROSSIGNOL J.M
"The DNA polymerase from Sulfolobus acidocaldarius . Replication at high temperature of long stretches of single-stranded DNA."
J. Mol. Biol., 209: 635-644 (1989).
24 - JAXEL, C, NADAL M., MIRAMBEAU G., FORTERRE P. TAKAHASHI M., and DUGUET M.
"Reverse gyrase performs unwinding of the double helix and single-strand cleavage in the absence of ATP."
EMBO J., 8: 3135-3139. (1989)
25 - FORTERRE P. ELIE C., SIOUD M. and HAMAL A.
" Studies on DNA polymerases and topoisomerases on archaebacteria".
Can. J. Biochem., 35, 228-233 (1989).
26. Salhi S., Elie C., Jean-Jean O., Meunier-Rotival M., Forterre P., Rossignol J.M. and De Recondo A.M.
"The DNA polymerase from the archaebacterium Sulfolobus acidocaldarius : a thermophilic and thermoresistant enzyme which can perform automated polymerase chain reaction".
BBRC, 167, 1341-1347.(1990).
27. Hamal, A., Forterre, P. and Elie C.
"Purification and characterization of a DNA polymerase from the archaebacterium Thermoplasma acidophilum."
Eur. J. Biochem., 190, 517-52 (1990).
28. Boutier de la Tout, C., Portemer, C., Nadal, M., Stetter, K., Forterre, P. and Duguet, M
"Reverse gyrase, an hallmark of the hyperthermophilic archaebacteria.
J. Bacteriol. 172; 6803-6808 (1990).
29. Boutier de la Tout, C., Portemer, C., HUBER, R.; Forterre, P. and Duguet, M
"Reverse gyrase is present in thermophilic eubacteria.
J. Bacteriol.173; 3921-3923 (1991).
30. Labedan B. and Forterre P.
"The potential of eukaryotic drugs for the isolation of resistance markers in halophilic archaebacteria"
Life Sciences, 10 : 17-24 (1991).
31. FORTERRE, P., CHARBONNIER, F., MARGUET, E. and HENCKES, G.
Chromosome structure and DNA topology in extremely thermophilic archaebacteria
Biochem. Soc. Symp. 58, 99-112 (1992).
32. ERAUSO, G., CHARBONNIER, F., BARBEYRON, T., FORTERRE, P. et D. PRIEUR, D.
Preliminary characterization of an ultrathermophilic archaebacterium with a plasmid isolated from North Fiji basinhydrothermal vent.
Compte rendu de l'Académie des Sciences de Paris, 314, 387-393 (1992)..
33. FORTERRE, P.
Neutral terms.
Nature, 335, 305 (1992)
34. FORTERRE, P.
The DNA polymerase from the archaebacterium Pyrococcus furiosus do not testify for a specific relationship between archaebacterium and eukaryotes.
Nucleic Acids Res., 20, 1811.(1992)
35 CHARBONNIER, F., ERAUSO, G., BARBEYRON, T., PRIEUR, D. and FORTERRE, P.
Evidence that a plasmif from a hyperthermophilic archaebacterium is relaxed at physiological temperatures.
J. Bacteriol. 174, 6103-6108 (1992)
36 FORTERRE, P., BENACHENHOU, N., CONFALONIERI, F., DUGUET, M., ELIE, C., AND LABEDAN, B.
The nature of the last universal ancestor and the root of the tree of life, still open questions.
Biosystem, 28, 15-32 (1993)
37 BENACHENHOU-LAHFA, N., FORTERRE, P., and LABEDAN, B.
Evolution of glutamate dehydrogenase genes: evidence for two paralogous protein families and unusual branching patterns of the archaebacteria in the universal tree of life.
J. Mol. Evol., 36, 335-346 (1993).
38 - FORTERRE, P., BENACHENOU-LAFHA, N. and LABEDAN, B.
Universal tree of life.
Nature, 362, 795 (1993)
39- CONFALONIERI, F., ELIE, C., NADAL, M., BOUTHIER DE LA TOUR, C., FORTERRE, P. and DUGUET, M.
Reverse gyrase : a helicase-like domain and a type I DNA topoisomerase in the same polypeptide.
Proc. Natl. Acad. Sci. 90, 4753-4757 (1993).
40 - BOUTHIER DE LA TOUR, C., PORTEMER, C., FORTERRE, P. HUBER, R. and DUGUET, M.
ATP-independent DNA topoisomerase from Fervidobacterium islandicum.
Biochem. Biophys. Acta, 1216, 213-220 (1993).
41- MANKIN, A., DERCHKACHEVA, N.I., LEVIEV, I.G., KAGRAMANOVA, V., FORTERRE, P. and GARRETT, R.
Stable maintenance in halobacteria of plasmids harboring rDNA.
System. Appl. Microbiol. 16, 672-679 (1994).
42 - FORTERRE, P., BERGERAT, A., GADELLE, D., ELIE, C., LOTTSPEICH, F., CONFALONIERI, F., DUGUET, M., HOLMES, M. and DYALL-SMITH, M.
Evolution of DNA topoisomerases and DNA polymerases : A perspective from Archaea.
System. Appl. Microbiol. 16, 746-758 (1994).
43 - CHARBONNIER, F. and FORTERRE, P.
Comparison of plasmid DNA topology among mesophilic and thermophilic eubacteria and archaebacteria.
J. Bacteriol. 176, 1251-1259.(1994).
44 - BENACHENOU-LAFHA, N., LABEDAN, B and FORTERRE, P.
Cloning by PCR and sequencing of the gene encoding glutamate dehydrogenase from the archaeon Sulfolobus shibatae : identification of putative amino-acid signatures for extremophilic adaptation.
Gene, 140, 17-24 (1994)
45 - MARGUET, E. and FORTERRE, P.
DNA stability at temperatures typical for hyperthermophiles
Nucl. Acid Res. 22, 1681-1686 (1994).
46 - MOJICA, F., CHARBONNIER, F., JUEZ, G., RODRIGUEZ-VALERA, F. and FORTERRE, P.
Effect of salt and temperature on plasmid topology in the halophilic archaeon Haloferax volcanii.
J. Bacteriol., 16, 4966-4973 (1994)
47 - GADELLE, D. and FORTERRE, P.
DNA intercalating drugs inhibit positive supercoiling induced by novobiocin in halophilic archaea.
FEMS Microbiol. Letters, 123, 161-166 (1994)
48 - BERGERAT, A., GADELLE, D. and FORTERRE, P.
Purification of a DNA topoisomerase II from the hyperthermophilic archaeon Sulfolobus shibatae.J. Biol. Chem., 269, 27663-27669 (1994)
49 - Forterre, P., Confalonieri, F., Charbonnier, F. and Duguet, M.
Speculations on the origin of life and thermophily : review of available information on reverse gyrase suggest that hyperthermophilic procaryotes are not so primitive
Origin of life, 25, 235-249 (1995)
50 - FORTERRE, P.
Looking for the most "primitive" organism(s) on Earth today : the state of the art.
Planetary and Space Sci. 43, 167-177 (1995).
51 - FORTERRE, P.
Thermoreduction, a hypothesis for the origin of procaryotes
C. R. Acad. Sci. Paris , 318, 415-422 (1995)
52 - BOUYOUB, A., BARBIER, G., QUERELLOU, J. and FORTERRE, P.
A putative SOS repair gene (dinF-like) in a hyperthermophilic archaeon
Gene, 167, 147-149 (1995)
53 - AAGARD, C., LEVEIEV, I., ARAVALLI, R.N., FORTERRE, P., PRIEUR, D. and GARRETT, R.A. General vectors for archaeal hyperthermophiles: strategies based on a mobile intron and a plasmid.
FEMS Microbiol. Rev. 18, 93-104 (1996)
54 - FORTERRE, P., BERGERAT, A. and LOPEZ-GARCIA, P.
The unique DNA topology and DNA topoisomerases of hyperthermophilic archaea.
FEMS Microbiol. Rev. 18, 237-247 (1996).
55 - ERAUSO, G., MARSIN, S., BENBOUZID-ROLLET, N., BAUCHER, M.F., BARBEYRON, T., ZIVANOVIC, Y., PRIEUR, D. and FORTERRE, P.
Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: Evidence for rolling-circle replication in a hyperthermophile.
J. Bacteriol. 178, 3232-3237 (1996)
60- FORTERRE, P.
A hot topic: the origin of hyperthermophiles.
Cell, 85, 789-792 (1996)
61 - BOUYOUB, A., BARBIER, G., FORTERRE, P. and LABEDAN, B.
The adenylosuccinate synthetase from the hyperthermophilic archaeon Pyrococcus species displays unusual structural features.
J. Mol. Biol. 261, 144-154 (1996)
62 - MARGUET, E., ZIVANOVIC, Y. and FORTERRE, P.
DNA topological change in the hyperthermophilic archaeon Pyrococcus abyssi exposed to low temperature.
FEMS Microbiol. Rev. 142, 31-36 (1966)
63 - GUIPAUD, O., LABEDAN and FORTERRE, P.
A gyrB-like gene from the hyprthermophilic bacterion Thermotoga maritima.
Gene, 174, 121-128 (1996)
64 - Borges, K. M.; Bergerat, A.; Allison, A. M.; Bogert, A.; DiRuggiero, J.; Forterre, P. and Robb, F.T.
Characterization of the Reverse Gyrase from the Hyperthermophilic Archaeon Pyrococcus furiosus
J. Bacteriol. 179, 1721-1726 (1997)
65 - KORT, R., LIEBL, W., LABEDAN, B., FORTERRE, P., EIGEN, R.I.L. and DE VOS, W.
Glutamate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima: molecular characterization and phylogenetic implications
Extremophiles, 1, 52-60, (1997)
66 - López-García, P and Forterre, P
DNA topology in hyperthermophilic archaea: reference states and their variation with growth phase, growth temperature, and temperature stresses
Molecular Microbiol. 23, 1267-1279, (1997)
67 - BERGERAT, A. DE MASSY, B., GADELLE, D., VAROUTAS, P.C., NICOLAS, A. and FORTERRE, P.
An atypical type II DNA topoisomerase from Archaea with implication for meiotic recombination
Nature, 386, 414-417 (1997)
68 - ELIE, C., BAUCHER, M.F., FONDRAT, C. and FORTERRE. P.
A protein relatede to eucaryal and bacterial DNA-motor proteins in the hyperthermophilic archaeon Sulfolobus acidocaldarius.
J. Mol. EvoL. 45, 107-114 (1997)
69 - GUIPAUD, O., MARGUET, E., NOLL, K., BOUTHIER DE LA TOUR, C. and FORTERRE, P.
Both DNA gyrase and reverse gyrase are present in the hyperthermophilic bacterium Thermotoga maritima.
Proc. Natl. Acad. Sci. 94, 10606-10611 (1997)
70 - BENBOUZID-ROLLET, N., LOPEZ-GARCIA, P., WATRIN, L., ERAUSO, G., PRIEUR, D. and FORTERRE, P.
Isolation of new plasmids from hyperthermophilic archaea of the order Thermococcales.
Res. in Microbiol. 148, 767-777 (1997)
71 - FORTERRE, P.
What can we learn from archaeal sequences ?
Current Opin. Genet. Dev. 7, 764-770 (1997)
72 - MARSIN, S. and FORTERRE, P.
A rolling circle replication initiator protein with a nucleotide-transferase activity encoded by the pasmid pGT5 from the hyperthermophilic archaeon Pyrococcus abyssi
Mol. Microbiol, 27, 1183-1192 (1998)
73 - MARGUET, E. and FORTERRE, P.
Protection of DNA by salts against thermodegradation at temperatures typical for hyperthermophiles
Extremophiles, 2, 115-122 (1998)
74 - LOPEZ-GARCIA, P., KNAPP, S., LADENSTEIN, R. and FORTERRE, P
In vitro DNA binding of the archaeal protein Sso7d induces negative supercoiling at temperature typical for thermophilic growth.
Nucl. Acids Res. 26, 2322-2328 (1998)
75 - BRITTON, K.L., STILLMAN, T.J., YIP, K.S.P., FORTERRE, P., ENGEL, P.C. and RICE D.W.
Insights into the molecular basis of salt tolerance from the study of glutamate dehydrogenase from Halobacterium salinarium.
J. Biol. Chem. 273, 9023-9030.
76 - BULHER, C., GADELLE, D., FORTERRE, P., WANG, J.C. and BERGERAT, A.
Reconstitution of DNA topoisomerase VI of the thermophilic archaeon Sulfolobus shibatae from subunits separately overexpressed in Escherchichia coli.
Nucl. acids Res. 26, 5157-5162
77 - GERARD, E., LABEDAN, B. and FORTERRE, P. Isolation of a minD-like gene in the hyperthermophilic archaeon Pyrococcus AL585, and phylogenetic characterization of related proteins in the three domains of life.
Gene, 222, 99-106 (1998)
78 - FORTERRE, P., CONFALONIERI, F. and KNAPP, S.
Identification of the gene encoding archaeal-specific DNA binding proteins of the Sac10b family
Mol. Microbiol.32, 669-670 (1999)
79 - FORTERRE, P.
Did life begin in hot water ?
Cell. Mol. Life Sci. 55, 687-690 (1999)
80- LOPEZ, P., PHILIPPE, H, MYLLYKALLIO, H. and FORTERRE, P.
Identification of putative chromosomal origins of replication in archaea.
Mol. Microbiol. 32, 883-886 (1999)
81 - FORTERRE, P.
Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins
Mol. Microbiol.33, 457-465 (1999)
82 - MARSIN, S. and FORTERRE, P.
The active site of the rolling circle replication protein Rep75 is involved in both site-specific nuclease, ligase and nucleotidyl-transferase activities
Mol. Microbiol. 33, 537-545 (1999)
83 - HETHKE C., BERGERTA, A., HAUSNER, W. FORTERRE, P. and THOMM, M.
Cell-free transcription at 95°C. Thermostability of transcriptional components and DNA topology requirements of Pyrococus transcription.
Genetics, 1325-1333 (1999)
84 - LOPEZ-GARCIA, P and FORTERRE, P.
Control of DNA topology during thermal stress in hyperthermophilic archaea: DNA topoisomerase levels, activities and induced thermotolerance during heat and cold shock in Sulfolobus.
Mol Microbiol. 33:766-777 (1999)
85 - FORTERRE, P. and PHILIPPE, H
Where is the root of the universal tree of life ?
Bioessays, 21, 871-879 (1999)
86 - PHILIPPE, H. and FORTERRE, P.
The rooting of the universal tree of life is not reliable
J. Mol. Evol. 49, 509-23 (1999)
87 - LOPEZ, P., FORTERRE, P. and PHILIPPE, H.
The root of the tree of life in the light of the covarion model
J. Mol. Evol. 49, 496-508 (1999)
88 – LOPEZ, P., FORTERRE, P., LE GUYADER, H. and PHILIPPE, H.
Origin of replication of Thermotoga maritima
TIG, 16, 59-60 (2000)
89 – MUSGRAVE, D., FORTERRE, P. and SLEZAREV, A.
Negative constrained DNA supercoiling in archaeal nucleosomes
Mol Microbiol. 35:341-349 (2000).
90 - LOPEZ-GARCIA, P and FORTERRE, P.
DNA topology and thermal stress response, a tale from mesophiles and hyperthermophiles
Bioessays, 22, 738-746 (2000)
91 - FORTERRE, P., BOUTHIER DE LA TOUR, C., PHILIPPE, H. and DUGUET, M.
Reverse gyrase from hyperthermophiles, probable transfer of a thermoadaptation trait from Archaea to Bacteria
Trends in Genetics, 16, 152-154 (2000)
92 – MARSIN S., MARGUET, E. and FORTERRE, P.
Topoisomerase activity of thez hyperthermophilic protein replication initiator protein Rep75
Nucleic Acids Res. 28, 2251-2255 (2000)
93 – MYLLYKALLIO, H., LOPEZ , P., LOPEZ-GARCIA, P., HEILIG, R., SAURIN, W., ZIVANOVIC, Y., PHILIPPE, H., FORTERRE, P. Bacterial Mode of Replication with an Eukaryotic-Like Machinery in a Hyperthermophilic Archaeon
Science, 288, 2212-2215 (2000)
94 – LOPEZ-GARCIA, P., FORTERRE, P., VAN DER OOST, J. and ERAUSO, G. Plasmid pGS5 fropm the hyperthermophilic archaeon Archa eoglobus profondus is negatively supercoiled.
J. Bacteriol, 182, 4998-5000 (2000)
95 - MYLLYKALLIO, H. and FORTERRE, P.
Mapping of a chromosome replication origin in an archaeon – Response
Trends Microbiol, 8, 537-539 (2000).
96 - MATTE-TAILLEZ, O, FORTERRE, P. and ZIVANOVIC, Y
Mining archaeal proteomes for eukaryotic proteins with novel functions : the PACE case.
Trends Genetics 16, 533-536 (2000)
97 – ZIVANOVIC, Y. MYLLYKALLIO, H. FORTERRE, P. Bacterial Genomic Reorganization upon DNA Replication,.
Science 292, 803-805 (2001).
98 - Gérard, E., Jolivet, E., Prieur, D. and Forterre, P. DNA protection is not involved in the radioresistance of the hyperthermophilic archaea Pyrococcus abyssi and Pyrococcus furiosus.
Mol. Gen. Genet. 266, 72-78 (2001)
99 - Matsunaga, F., Forterre, P., Ishino, Y., and Myllykallio, H. In vitro interactions of archaeal Cdc6/Orc1 and minichromosome maintenance proteins with the replication origin.
Proc. Natl. Acad. Sci. USA, 98, 11152-11157 (2001)
100 - Bulher, C, Lebbinck, J., Bocs, C., Ladenstein, R., and Forterre, P. DNA topoisomerase VI generates ATP-dependent double-stranded breaks with two nucleotide overhangs.
J. Biol. Chem., 276, 37215-37222 (2001)
101 – FORTERRE, P.
A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific protein
Trends in Genetics, 18, 236-238 (2002)
102 – MATTE-TAILLEZ, O., BROCHIER, C., Forterre, P., and PHILLIPPE H.
Archaeal phylogeny based on ribosomal proteins.
Mol. Biol. Evol. 19, 631-639 (2002)
103 – FILEE, J., FORTERRE, P., SEN-LI, T. and LAURENT, J.
Evolution of DNA polymerase families : evidences for multiple gene exchange between cellular and viral proteins.
J. Mol. Evol. 54, 763-773 (2002)
104 - Zivanovic, Y., Lopez, P., Philippe, H., and ForterrE, P.
Genome comparision evidences chromosome shuffling-driven evolution in
Pyrococcus
Nucleic Acids Research, 30, 1902-1910 (2002)
105 - Myllykallio, H., Lipowski, G., LeduC, D., Filee, J., Forterre, P. and Liebl, U.
Identification of an alternative flavin dependent mechanism for thymidylate synthesis
Science, 297, 105-107. (2002)
106 - CONSTANTINESCU, F., FORTERRE, P. and ELIE, C.
NurA, a novel 5’ to 3’ nuclease gene linked to rad50 and mre11 homologs of thermophilic Archaea
EMBO reports, 537-542 (2002)
107 - NapolI, A., Zivanovic, Y. Bocs, C., Buhler, C., , Rossi, M. Forterre, P. and Ciaramella, M.
DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus
Nucleic Acids Res., 30, 2656-2662, (2002)
108 - Lucas, S. ToffiN, L., Zivanovic, Y. Charlier, D., Moussard, H. Forterre, P., Prieur, D.and Erauso, G.
Construction of a Shuttle Vector and Spheroplasts Transformation of the Hyperthermophilic archaeon Pyrococcus abyssi
Appl. Env. Microbiol. 68, 5558-5536 (2002).
109 - COHEN, G. BARDE, V., FLAMENT, D., GALPERIN, M., HEILIG, R., LECOMPTE, O., Poch, O., PRIEUR, D., QUERELLOU, J., RIPP, R., THIERRY, J.C., VAN DER OOST, J., WEISSENBACH, J., ZIVANOVIC, Y. and FORTERRE, P.
An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi
Mol. Microbiol. 47:1495-1512 (2003).
110 - GADELLE, D., FILEE, J., BULHER, C. and FORTERRE, P.
Phylogenomics of Type II DNA topoisomerases.
Bioassays.25:232-242 (2003)
111 - MATSUNAGA, F., NORAIS, C., FORTERRE, P. and MYLLYKALLIO, H.
Identification of short ‘eukaryotic’ Okazaki fragments synthesized from a prokaryotic replication origin.
EMBO reports, 4:154-158. (2003)
112 – FILE, J., FORTERRE, P. and LAURENT, J.
The role played by viruses on the Evolution of their cellular host : a view on informational proteins phylogenies.
Res. In Microbiol. 154, 237-243, (2003)
113 - Armengaud J, Fernandez B, Chaumont V, Rollin-Genetet F, Finet S, Marchetti C, Myllykallio H, Vidaud C, Pellequer JL, Gribaldo S, Forterre P, Gans P.
Identification, purification, and characterization of an eukaryotic-like phosphopantetheine adenylyltransferase (coenzyme A biosynthetic pathway) in the hyperthermophilic archaeon Pyrococcus abyssi.
J Biol Chem. 278, 31078-31087, (2003).
114 - Jolivet, E. Matsunaga, F., Ishino, Y. Forterre, P. Prieur, D. and Myllykallio, H.
Mechanism Resistance to g-irradiation of the hyperthermophilic archaeon Pyrococcus abyssi: evidence for an efficient repair of the double-strand breaks.
J. Bacteriol. 185, 3958-3961, (2003).
115 - Jolivet, E., L’Haridon, S. Corre, E., Forterre, P. and Prieur, D. Thermococcus gammatolerans sp. Nov., a hyperthermophilic archaeon from deep-sea hydrothermal vents that resists to ionizing radiation.
Inter. J. Syst. Microbiol. 53, 847-851, (2003)
116 - JOLIVET, E., CORRE, E., L’HARIDON, S., FORTERRE, P. and PRIEUR,
Thermococcus marinus sp. nov., and Thermococcus radiotolerans sp. nov., two hyperthermophilic Archaea from deap-sea hydrothermal vents that resist ionizing radiation
Extremophiles, 8, 219-27, (2004)
117. LEPAGE, E., MARGUET, E., GESLIN, C. MATTE-TAILLEZ, O. ZILLIG, W., FORTERRE, P. and MATTE-TAILLEZ, P.
Molecular diversity of new Thermococcales isolates from a single area of hydrothermal Deap-sea vents as reaveled by Randomly Amplified Polymorphic DNA fingerprinting and 16S rRNA gene sequence analysis.
Appl Environ Microbiol, 70, 1277-1286 (2004)
118 - BROCHIER, C. FORTERRE P. and GRIBALDO S.
Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox
Genome Biology, 5, R17.(2004)
119 - Constantinesco F., Forterre P., Koonin E., Aravind L., and Elie C.
A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and nurA genes in thermophilic Archaea.
Nucleic Acids Res. 32,1439-1447 (2004)
120 – BROCHIER, C., GRIBALDO, S., ZIVANOVIC, Y. CONFALONIERI, F. and FORTERRE, P.
Nanoarchaea : representative of a novel archaeal phylum or a fast evolving euryarchaeal lineage related to Thermococcales ?
Genome Biology, 6:R42. (2005)
121 – FORTERRE, P.
The two ages of the RNA world, and the transition to the DNA world : a story of viruses and cells.
Biochimie. 87, 793-803 (2005
122 – GADELLE, D., BOCS, C. GRAILLE, M. and FORTERRE, P.
Inhibition of DNA topoisomerase VI activities by the Hsp90 inhibitor radicicol..
Nucl. Acids Res. 33, 2310-2317 (2005)
123 – Brochier, C., Forterre P., Gribaldo, S.
An emerging phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences.
BMC Evol Biol. 5:36 (2005
124 - Filée, J., Forterre, P.
Viral proteins functioning in organelles: a cryptic origin? 2005.
Trends in Microbiol., 13, 510-513 (2005)
125 – FORTERRE, P.
Three RNA cells for ribosomal lineages and three DNA viruses to replicate their genomes: a hypothesis for the origin of cellular domain
Proc. Natl. Acad. Sci. in press (2006
116 – FORTERRE, P.
The origin of viruses and their possible roles in major evolutionary transitions
Virus Res. in press (2006)
PUBLICATIONS DANS DES LIVRES ET REVUES
1 - FORTERRE P. and KOHIYAMA M.
"The role of ATP in chromosome replication studied in toluenized Escherichia coli".
In "Mechanism and regulation of DNA replication",
A. Kolber and M. Kohiyama eds. Plenum Press, New York, 23-35 (1973).
2 - FORTERRE P., RICHET E. and KOHIYAMA M.
"The role of ATP in E. coli chromosome replication".
In "DNA synthesis : Present and Future", I. Molineux and M. Kohiyama eds. Plenum Press, New York, 397-407 (1978).
3 - FORTERRE P., ASSAIRI L. and DUGUET M.
"Topology, Type II DNA topoisomérases and DNA replication".
In "New Approaches in Eukaryotic DNA replication", A.M. De Recondo ed. Plenum Press, New York, 123-178 (1983)
4 - FORTERRE P.
"Les archaebactéries : origine et évolution des lignées cellulaires eucaryotes et procaryotes".
L'année biologique. 25, 273-306 (1986).
5 - FORTERRE P.
"DNA polymerases and topoisomerases in archaebacteria: potential application".
In Microbiology of extreme environments and its potential for microbiology, M.S. Da Costa; J.C. Duarte and R.A.D. Williams, eds., Elseivier Applied Science, London.49, 152-158 (1989)
6 - FORTERRE, P., GADELLE, D., CHARBONNIER, F. and SIOUD, M.
"DNA topology in halobacteria"
in "General and Applied aspects of halophilic microorganism", R. Valera, ed.
Plenum press New York., 333-338 (1991)
7 - ELIE, C., HAMAL, A., BAUCHER, M.F. and FORTERRE, P.
"DNA polymerases from thermoacidophilic archaebacteria"
in "Proceedings of the 5th European Congress on Biotechnology"
sous presse (1990)
8 - GADELLE, D. and FORTERRE, P.
"Potential of an archaebacterial system to screen DNA binding drugs and inhibitors of type II DNA topoisomerases.
in "Proceedings of the 5th European Congress on Biotechnology"
sous presse (1990).
9 - BENACHENOU, N., FORTERRE, P. and LABEDAN B.
Evolution of glutamate dehydrogenese genes / evidence for two families of paralogous proteins and branching patterns of the tree urkingdoms.
in "Frontiers of Life", (Trân Thanh Vân J.K., Mounolou, J.C., Shneider, J and Mc Kay, C eds), Editions Frontières, Gif-sur-Yvette -France, 427-428 (1992).
10 - FORTERRE, P.
New hypotheses about the origins of viruses, prokaryotes and eukaryotes.
in "Frontiers of Life". (Trân Thanh Vân J.K., Mounolou, J.C., Shneider, J and Mc Kay, C eds), Editions Frontières, Gif-sur-Yvette -France, 221-234, (1992).
11 - FORTERRE, P. and ELIE, C.
Chromosome structure, DNA polymerases and topoisomerases in Archaebacteria (Archaea). in "The Biochemistry of Archaea (Archaebacteria)", New Comprehensive Biochemistry, Vol. 26 (M. Kates, D.J. Kuschner and A. Matheson eds), 325-366 (1993)
12 - FORTERRE, P.
The reverse gyrase of hyperthermophilic archaeobacteria: origin of life and thermophily
Microbiologia SEM, 11, (1995)
13 - CHARBONNIER, F., FORTERRE, P., ERAUSO, G. and PRIEUR, D.
Purification of plasmids from thermophilic and hyperthermophilic archaebacteria.
In Archaea: A Laboratory Manual. Robb, F. T. (Editor in Chief), A. R. Place, S. DasSarma, H. J. Schreier and E. M. Fleischmann (eds). Cold Spring Harbor Laboratory Press, NY.Thermophiles pp 87-90 (1995)
14 - FORTERRE, P.
Protein versus rRNA : rooting the universal tree of life ?
ASM news, 63, 2, 89-95 (1997).
15 - FORTERRE, P.
Les génomes compactes
Cahiers du CEPH, Vème Symposium de Génétique Humaine. 17-21 (1997)
16 - FORTERRE, P.
Le dernier ancêtre commun et ses prédecesseurs
Cahiers de la Fondation des Treilles 8, 79-94 (1997)
17 - BRACK, A., FORTERRE, P., PILLINGER, C., HORNECK, G., SCHIDLOWSKI, M. and WÄNKE, H.
Limits of life under extreme conditions
ESA exobiology science team study on the search for life in the solar system 53 - 68, Fitton, B. ed. June 1997
18 - Forterre, P., Watrin,L., Zivanovic Y. and Prieur, D.
Perspectives in the study of hyperthermophilic archaea from deep marine environment.
Proceedings from the US-EC workshop on marine microorganisms, 59-65 (1998)
19 - FORTERRE, P.
Were our ancestors actually hyperthermophiles ? viewpoint of a devil's advocate
in "Thermophiles and the origin of life" (J. Wiegel, M. Adams and eds..), Taylor & Francis Publisher (London), 137-146 (1998)
20 - FORTERRE, P. and PHILIPPE, H.
The last universal common ancestor (LUCA): simple or complex ?
The Biological bulletin , Woods Hole, 196, 373-377 (1999)
21 - MARSIN, S. and FORTERRE, P.
The pGT5 replication intiator protein Rep75 from Pyrococcus abyssi
Methods in Enzymology, in press
22 - MARGUET, E. and FORTERRE, P.
Stability and manipulation of DNA at extreme temperatures
Methods in Enzymology, in press
23 - GUIPAUD, O. and FORTERRE, P.
DNA gyrase from Thermotoga maritima
Methods in Enzymology, in press
24 - BOCS, C., BUHLER, C., BERGERAT, A. and FORTERRE, P.
DNA topoisomerase VI from hyperthermophilic archaea.
Methods in Enzymology, in press
25 - LOPEZ-GARCIA, P and FORTERRE, P.
Thermal stress in hyperthermophiles
In Bacterial Stress Responses, G. Storz and R. Hengge-Aronis, eds.
ASM Press, Washington, 369-382 (2000)
26 - Forterre, P.,
Genomics and early cellular evolution. The origin of the DNA world.
C.R. Acad. Sci./Life Sciences 324, 1-10 (2001)
27 - FORTERRE, P., BROCHIER, C. and PHILIPPE, H.
Evolution of the Archaea
Theoretical Population Biology, 61, 409-420 (2002)
28 - FORTERRE, P.
The origin of DNA genomes and DNA replication proteins.
Curr Opin Microbiol. 5, 525- (2002)
29 - FORTERRE, P.
The great virus comeback-- from an evolutionary perspective.
Res Microbiol. 154, 223-225. (2003)
31 - FORTERRE P.
Strategies of hyperthermophiles in adaptation of nucleic acids at high temperatures.
in “ Extemophiles ” Gerday C. and Glansdorff, N. eds in Encyclopedia of Life Support Systems (EOLSS ), EOLSS Publishers,Oxford UK ,(http;//www.eolss.net )
in press (2003)
30 - FORTERRE, P., FILEE, J. and MYLLYKALLIO, H. Origin and evolution of DNA and DNA replication achineries. In The Genetic Code and the Origin of Life" L. Ribas, ed. Landes Bioscience (2004), pp145-168
32 - Prieur D, Erauso G, Geslin C, Lucas S, Gaillard M, Bidault A, Mattenet AC, Rouault K, Flament D, Forterre P, and Le Romancer M.
Genetic elements of Thermococcales.
Biochem Soc Trans. 32, 184-187 (2004)
33 - GRIBALDO S. and FORTERRE, P.
Looking for the most 'primitive ' life forms : pitfalls and progresses.
In : Lectures in Astrobiology. Gargaud M, Barbier B., Martin H., Reisse J. (eds) Springer-Verlag, Berlin, Heidelberg. Vol 1. pp 595-615 (2005)
34 – FORTERRE, P. GRIBALDO S. and BROCHIER, C.
Luca : à la recherche du plus proche ancêtre commun universel.
Médecine et Science, 10, 860-865 (2005).
REVUES OU ARTICLES DANS DES OUVRAGES OU REVUES POUR LE GRAND PUBLIC.
1 - FORTERRE, P.
"Rencontre du troisième type : les Archaebactéries".
Siences et Vie, hors série, spécial "Evolution" Décembre (1990).
2 - FORTERRE, P.
"Les archaebactéries extrêmophiles"
Aspect de la Recherche 14-20, (1990).
3 - FORTERRE, P.
"Les origines de la vie"
Biofutur, Novembre (1991), 14-17.
4- FORTERRE, P
"Le problème du progénote"
Encyclopédie Universalis, La Science au présent,1, 241-242 (1992)
5 - FORTERRE, P.
Les archaebactéries
Encyclopédie Quillet, Editions Hachette, 245-252 (1993).
6 - FORTERRE, P
Les germes extrêmophiles.
Encyclopédie Universalis, Universalia 94, 199-203 (1994)
7 - Forterre, P.
Les origines de la vie.
Regards, 13, 19 (1996).
8 - FORTERRE, P
Les Archaebactéries
La Cellule, dictionnaire encyclopédique (Aimé-Gentil, N. ed), Vuibert, 12-14 (1997)
9 - Forterre, P.
A la recherche de l'ancêtre commun de toutes les cellules
Pour la Science, 88-92, Numéro Hors-Série: l'évolution, Janvier (1997)
10 - FORTERRE, P.
La cellule ancestrale était-elle simple ou complexe ?
Pour la Science, dossier hors-série, avril 98, 22-24 (1998)
11 - FORTERRE, P. and PHILIPPE, H.
La préhistoire du vivant
Biofutur, 184, 18-21 (1998)
12 - FORTERRE, P.
Les hyperthermophiles sont-ils nos ancêtres ?
La Recherche, 317, 36-43, (1999)
13 - FORTERRE, P.
L’Origine du génome
La Recherche, 336, 34-39, (2000)
14 – FORTERRE , P.
Origine et évolution des microbes hyperthermophiles
Astronomie, 115, 298-301 (2001)
15 – Forterre, P., Zivanovic, Y., Matte-Taillez, O., Matsunaga, F. and Myllykallio, H.
Ce qui est vrai pour Pyrococcus est (presque) vrai pour l’éléphant.
Medecine Science, 17, 939-945 (2001)
16 - FORTERRE, P.
Phylogénie Moléculaire
Universalia 2002, 288-289 (2002)
CRITIQUES D'OUVRAGES
1 - FORTERRE, P.
Compte rendu d'ouvrage "Archaea, a Laboratory manual, Archaea"
La Recherche, Jan., p103 (1996).
2 - BENBOUZID-ROLLET, N. and FORTERRE, P.
Compte rendu d'ouvrage "Ecology and evolution of the anoxic worlds"
J. Evol. Biol., in press
3 - FORTERRE, P.
New viruses for the new millenium
Trends Microbiol, 9, [2001]
4 - FORTERRE, P.
Back to Bergey’s
Trends in Microbiol. 10, 302 (2002)
PARTICIPATION A DES INTERVIEWS ET/OU A LA REDACTION D'ARTICLES JOURNALISTIQUES.
1. Science et Avenir. "Nos ancêtres, les archéobactéries ?" Octobre 1991,
2. France-Culture Emission Archipel Science, A propos du congrès de Blois "Frontier of Life" Novembre 1991
3. Pour la Science
4. France-Info "Les archaebactéries" 1992
5. Triolo, "Interview sur les origines de l'homme" Novembre 1992 .
6. Plein Sud, "A la recherche de l'ancêtre universel" Janvier 1993
7. Consultant et participant pour l'émission Connaissance de la Science (TV5) : "Les origines de la vie", Décembre 1993.
8. Plein Sud, "Aux racines de la vie", Décembre 1993.
9. Consultant pour la Grande Galerie du Muséum d'Histoire Naturelle de Paris, 1992-995
10. Consultant pour le Muséum d'histoire Naturelle de Tours, 1994-1995
11. Consultant pour la rédaction d'un article dans Science et vie , Mars 1995
12. Participation à l'emission Tempus, FR3, 28 avril 1995
13. Consultant pour la rédaction d'un article dans Euréka , Décembre 1996
14. Consultant pour la rédaction d'un article dans L'évenement du Jeudi , Décembre 1996
15. Conseiller pour la réalisation d'un film coproduit par le CNRS et l'IFREMER : La vie à très haute température.
16 Participation à l'emission les enigmes de la Biologie, FR2, : Les champions de l'extrême.
17 Consultant pour la rédaction d'un article dans Science et Avenir (de LUCA à LUCY), Novembre 1997
Participation à l'emission Les Ecrans du savoir, “ L’homme à l’égal de Dieu ” , La Cinquième, 19 octobre 2000
|
Last update: Janvier 2006/ GS
|