Recherche / Départements scientifiques / Biologie cellulaire et infection / Unités et groupes / G5 Imagerie et Modélisation / Software
Computational Imaging & Modeling Group
Software
nucloc (software for analyzing gene positions in the yeast nucleus):
We have developed a series of software tools to compute and analyze the positions of genomic loci from thousands of yeast cells observed in fluorescence microscopy.
These tools are available freely to academic and non-profit researchers (provided you register and accept our license agreement) at:
www.nucloc.org.
The software is at the core of the method described in Berger et al. Nature Methods 5, 1031 - 1037 (2008) [Abstract on PubMed] [Full text on Nature Methods].
QuickPALM (software for super-resolution microscopy):
A free and fast algorithm for reconstructing super-resolution 3D images in PALM/STORM microscopy is available for download at :
http://code.google.com/p/quickpalm/
This website also offers tutorials about using the software and practical information on hardware issues.
The algorithm is presented in Henriques et al. Nature Methods 7:339–340 (2010).
We have developed a series of software tools to compute and analyze the positions of genomic loci from thousands of yeast cells observed in fluorescence microscopy.
These tools are available freely to academic and non-profit researchers (provided you register and accept our license agreement) at:
www.nucloc.org.
The software is at the core of the method described in Berger et al. Nature Methods 5, 1031 - 1037 (2008) [Abstract on PubMed] [Full text on Nature Methods].
QuickPALM (software for super-resolution microscopy):
A free and fast algorithm for reconstructing super-resolution 3D images in PALM/STORM microscopy is available for download at :
http://code.google.com/p/quickpalm/
This website also offers tutorials about using the software and practical information on hardware issues.
The algorithm is presented in Henriques et al. Nature Methods 7:339–340 (2010).